EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-10983

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr17:26050520-26051760

Target genes

Number: 28
Name	Ensembl ID

Chtf18	ENSMUSG00000019214
Rpusd1	ENSMUSG00000041199
Msln	ENSMUSG00000063011
Narfl	ENSMUSG00000002280
Haghl	ENSMUSG00000061046
Ccdc78	ENSMUSG00000071202
Fam173a	ENSMUSG00000057411
Metrn	ENSMUSG00000002274
Fbxl16	ENSMUSG00000025738
Stub1	ENSMUSG00000039615
Rhbdl1	ENSMUSG00000025735
RP23	ENSMUSG00000093593
Rhot2	ENSMUSG00000025733
Wdr90	ENSMUSG00000073434
Gm10012	ENSMUSG00000057580
Rab40c	ENSMUSG00000025730
Pigq	ENSMUSG00000025728
Nhlrc4	ENSMUSG00000090113
Solh	ENSMUSG00000037326
Rab11fip3	ENSMUSG00000037098
Decr2	ENSMUSG00000036775
Nme4	ENSMUSG00000024177
Gm8186	ENSMUSG00000049124
Tmem8	ENSMUSG00000024180
Axin1	ENSMUSG00000024182
Pdia2	ENSMUSG00000024184
Rgs11	ENSMUSG00000024186
Arhgdig	ENSMUSG00000073433

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr17:26051189-26051201	AAACAAATATTC	-	6.18
Foxq1	MA0040.1	chr17:26051171-26051182	TATTGTTTATA	+	6.32
TCF3	MA0522.2	chr17:26050649-26050659	AACACCTGCT	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04328

chr17:26049957-26051840

Cortex

Enhancer Sequence

TACACGGACT CAGAGGGACT ACTTTTCCAC CTACCTCCCA CGCAAGCACA GTCTCCTAGA 60
CACCGTCCTT GGCCCAGTCA GCCTCTCTGT GGATGCTCCG CCCCCGCCAA CCTCATACTG 120
CTGGTCCCCA ACACCTGCTT TACTGGCATG TAGCTAATCA GCCTGGCCAC CTACCTCCCG 180
TTCCTTGTCT TCTTCAGGTT TCTCTCAACC AGCATGCTAA ATGCTAAAGG CTGTTTGTTC 240
CCTGCATTCT TAGATAGCAG AGACGTTCTG GTCAATGTAC AACTCCACAG CTTCCTGTTA 300
AATGTGTCCT AGTTTCAGGC TCCACACCTC AGTGAGGCAG CTTTGTAGGG ATCAAGCAAT 360
TTTATACCTT TCCAGTTATC ATCTTCAAAA AGAACAGGCA GCAAAAGGAC CTGCCAAGGG 420
CCAGTTCCCT CCCTTCATGT CCTTCCCACC CCCTGCTCAG CTCCTGATAC TGCTTCCTTC 480
CTGAAATGCT GCTGTTAAAT TTAGATCACC CCCAAGCCAC AAACAATCAC GCTGATGGAA 540
AAGATGACAT TATCTATGCA ACTTAACAAT CCCAAGTGTG ACCACACAAT CCTCCCAGAA 600
AGCTGACAGT CTTGCTGGGC TTGCCATCTG AGCCTTTGCT ATGTCACTTG GTATTGTTTA 660
TACTACCAAA AACAAATATT CTAGTTAAAT GTGGTAATCT TACTACTTGG GGAGCAGAGG 720
CAGAAGCAGG AGGATCACTT TAAGTTCATG GCCAGCCTGG TCTAAATATT GAGTTCTAGG 780
CCAGTCAGAG TTATATAATG AGACCTTGTC CCAAAAAGTC TGTAAAAGCA AACTGTCCTC 840
TAATCGGCTC TGGCTTGTAG CCTGCACTTC TGGCCGGCAG GTGGGATGCA CTTAAGACAT 900
CCACAAATAC ATGACTGAAC AGATGAATGA AATGCTGAGG GTGAGGTGCA GGCACTGTGA 960
GAAAGACGGA CCTAGTCAGA GCCAACAAAC AGAAGGTAAC CAACCCCCAG AGGGTGGCTT 1020
ACATGCCCAG GCACAATAGG AACCAATGTC CAGGTGAATG CTTCTCTGGG AATGGAGCAG 1080
ACAAGCCAGC ATTTGCAGGG CCCGTGTCAA ACTATAATGG CCTGTCAAGA AGTAACAAGG 1140
ATGATATGGC TTTTCAGAAA ATAGCTGGGT CAGGTAGGAG CTGGGACAGA TCTCCTAAGG 1200
TGCGGATAGC GAATCAAGTG TACAGAAGCA GCGAGTGTCT 1240