EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-09738

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr16:4893850-4895300

Target genes

Number: 8
Name	Ensembl ID

Dnaja3	ENSMUSG00000004069
Hmox2	ENSMUSG00000004070
4930562C15Rik	ENSMUSG00000022518
Fam100a	ENSMUSG00000039568
Mgrn1	ENSMUSG00000022517
Anks3	ENSMUSG00000022515
Rogdi	ENSMUSG00000022540
Glyr1	ENSMUSG00000022536

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr16:4894797-4894812	AGGGGTCAGGGGTCA	+	7.2
Nkx2-5(var.2)	MA0503.1	chr16:4895105-4895116	CTTGAGTGGCT	-	6.62
RXRB	MA0855.1	chr16:4894798-4894812	GGGGTCAGGGGTCA	+	6.04
RXRG	MA0856.1	chr16:4894798-4894812	GGGGTCAGGGGTCA	+	6.1
TCF3	MA0522.2	chr16:4894913-4894923	AGCAGGTGTT	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_09121

chr16:4894036-4895012

Lung

Enhancer Sequence

ACATTGAAGT GGGCCAGGAC AGGAACTCAC ACAGGGCCAG ACCCTGAAGG CAGGGGCTGA 60
TGCAGAGGCA GTGGAGGGGT GCTGCTTACT GGCTTGCTCA GCCTACTTTC TTATAGAACC 120
CAGGAAAACA ATTCCAGGGA TGGTACCACC CACAATGGGC TAGGCCTTCC CCTATAAGTC 180
ACTAATTAAG AAAATGCAGT ATAGACTTGC CTACAGCCTA ATCTTGTGAA GTTATTTTCT 240
TAATTGAGGT TTCCCCCTCT CAGACGTCTT TCGTTTTGTC AAGTTGACAT AAAACTAACC 300
AGTACAGCCT GCTTGTAAGG GACTTGGTAG CCACAACGCG CCAGCCTTAG GCATTGCAGC 360
TCTTTTCCGC GTTCCCTCTG ATTTGGCATT TTATATACAA TGTGACCAGG TCAGGTTTGT 420
AGAGCTGTGA ACTTTCTGAA GAGTCCTCCT GCGTTGTACC CTTTCTGCTG TGGGTGAAGA 480
GAGTAGGGTG ACATAATAGT CCTGTGTGTG TCTCTGGGGA TGCCCACTCG CCCTTCCTTT 540
TAGGAAGTGA ATCAGACAGG AACTGGGCTG AAGGGAGCCC GAGTCTGGGA ACTTTTATGC 600
TTAAATGGAA AGTGTGGGGT CTTTGGGACA CAGGAATCTG GTTTTATCAC AGGTTTCCCT 660
TCTGGCTTCT GTGGAACCCC AGTCCTTAGG TCCACATGGT GACAGCAGCT GTGAGGATGT 720
CCTGAGTTCA GGATCTGCCT ACTCAGAGTC TAACAGCTTG CTCATCAAGC CCTGTCTCAC 780
TCCTGTTGAT GCAGAGGCAC AGCCCTTGTT CATTTCCTCA CACAGCCGAG GGCCAAAGCA 840
GGCGTGAAGT CACTAAGCAC ACACTTAAGT GACTGGCATG TGGAGCTGAC TCCCTTGCCC 900
TAAGAAACCA CAACATACCA GGTCACTCAA AAAAGAACTA GTGGAGAAGG GGTCAGGGGT 960
CACCTTCCTT CTGGTGGTGT GTGAGTTCCT TTCATCTCTG TGGCTGAGAA GCCCTCCATG 1020
GTATGGGTAA CCATGCTCTC TTTCCCTGTC TCCATTTACC CAGAGCAGGT GTTCCTCTTT 1080
CCTCAGGTAT GTGGCAGAGC CACATCCACC TTGTCTTAGA TGGGGTTGAG GCTTCTGTAA 1140
GAGGCAGAAG TCAAGAACTC TGCCCTGTTG TGTGGGATGT ATGTAGTCCA GTGGGAGGCC 1200
TTGGTTTCAT TCCCACCCAC CCACAAAAGT ATAAAAGCAA AGTGTAACCT AGCTCCTTGA 1260
GTGGCTGAGC AGGAGGTTTG AGCCCATAAA TATGAGATCA ACTTGGACAA CATATTGAGA 1320
CTCCTATCTC AAGTAAATAG AAAAGGGACC TTTCCCCAGT GGTGAATTCT GCTCTTGCCT 1380
AAAAGGCTCT GCTCACCTCT CTTACTAAGG TAGTTAAGAC TGAGAGTAAG CCGGGCGTGG 1440
TGGCTCACGC 1450