EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-09177

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr15:78941870-78942500

Target genes

Number: 20
Name	Ensembl ID

Cdc42ep1	ENSMUSG00000049521
Lgals2	ENSMUSG00000043501
Gga1	ENSMUSG00000033128
Sh3bp1	ENSMUSG00000022436
Lgals1	ENSMUSG00000068220
Nol12	ENSMUSG00000033099
Triobp	ENSMUSG00000033088
Gcat	ENSMUSG00000006378
Ankrd54	ENSMUSG00000033055
Eif3l	ENSMUSG00000033047
Micall1	ENSMUSG00000033039
1700088E04Rik	ENSMUSG00000033029
Polr2f	ENSMUSG00000033020
Sox10	ENSMUSG00000033006
Pick1	ENSMUSG00000068206
Pla2g6	ENSMUSG00000042632
Maff	ENSMUSG00000042622
Tmem184b	ENSMUSG00000009035
Csnk1e	ENSMUSG00000022433
Ddx17	ENSMUSG00000055065

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr15:78942452-78942472	TGTGTGTGTGTGTTGGGGGG	-	6.69
RREB1	MA0073.1	chr15:78942450-78942470	TGTGTGTGTGTGTGTTGGGG	-	7.29

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_04972	chr15:78941457-78943718	E14.5_Heart
mSE_06853	chr15:78939101-78943758	Heart
mSE_11674	chr15:78937667-78942435	Placenta

Enhancer Sequence

GGTCTACAGA GAGAGTTCCA GGACAGCCAG GGCGACACAG AGAAACCCTG TCTTGAAAAA 60
ACAACAACAA CAACAAAACA CCAGCTTACT GTAACACAAG TGGGCCTAAT TGGAGGCTTC 120
CAGGGGACAC TTCCTGGACA AAAGGCAAAA GAGAAGGCGC CAAGGCCCCA CCTGAGGACT 180
TTCAAAGCCT GCAGGTGTCC AAAGAGGCAG GTGTGAAGGG TGTTCCCTCC CAAGCAGACT 240
TCTAGACTAA AATCCAGTTG TTCATTTGCT TAGGGAGGCT GGGGCCTGGA CCATGCTAAT 300
TGCATGAGCG GCCAGGTCCC TCATGAAGCA CCGAGAAGGA TAGAGAATCG TCTGTCCTCT 360
GTTCATGTAT TTATCTGTTA GAGACTGAAC CCAAATCCAT GTGCATGCTA GGCAAACTCT 420
CATCCCCTGA TTTATACCCT CAGCACTTAT GGGCAGATCT GTGTAAGAGC AGCAGTTGGG 480
TGACTGCCAA AGCCATTTGA TAAAGTGGTT CAGGTCTTTG AGGCTGCCAG TGCTGGCCCA 540
GACCACAGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTTGGGG 600
GGCCGGCCCA TGTATGCCCT TCTCTGTCCT 630