EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-05537

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr12:70613920-70614520

Target genes

Number: 13
Name	Ensembl ID

Rps29	ENSMUSG00000034892
Rpl36al	ENSMUSG00000049751
Mgat2	ENSMUSG00000043998
Pole2	ENSMUSG00000020974
Klhdc1	ENSMUSG00000051890
Klhdc2	ENSMUSG00000020978
Nemf	ENSMUSG00000020982
Arf6	ENSMUSG00000044147
Gm9887	ENSMUSG00000052673
Mettl21d	ENSMUSG00000049882
Sos2	ENSMUSG00000034801
L2hgdh	ENSMUSG00000020988
Atp5s	ENSMUSG00000054894

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr12:70614409-70614430	AAAGGAAAAGTGAAAGTCATC	-	7.4
Nkx2-5(var.2)	MA0503.1	chr12:70614049-70614060	CTTGAGTGGCT	-	6.62

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01286	chr12:70602587-70640971	Th_Cells
mSE_07462	chr12:70611874-70618760	Intestine

Enhancer Sequence

CGCTCACTGT CTCTTATGAA GAAACTTTGC AAATCTTTCC TTCCCTGAAA GTCAAACTGC 60
AAGTTCCATG AGGACTTACC AGGGGTGGCA CCTAGTAGGG CCCCAGTAAA CATCTGTTAA 120
GTGTCTGACC TTGAGTGGCT TGGATACCAT TAAGATGACA GTTTTAAGGA CGTTCTCAGT 180
GAGACTTTTC TCTTGGGCTA ACCTCCCCAG CAGACAAGGC CAGCTTCTCC TAGGATCTGG 240
GCACCCAGGA CACCCTGGGG AGAGCATGGG CTGAGCTGTC AGGCAGGTCC CTGAGGAGGA 300
CTCCTGTGCC CTCAATACCC TTCACTTCAC AAAGCCAGCT CTAGCCGGGG CAAGCCCAGG 360
AGAGTGGCCA AACAGAAAAT GTAGGCGTGT GGTTTGAGAT CTGAAAGTAC CACCTACTGC 420
CCCGATGGGG GAGGAGAAGT GGACTCCTGC CCTCTCCTGG GCCCCACATC ATCCTCAGGC 480
CCCAGAGGGA AAGGAAAAGT GAAAGTCATC GATGTAGATA AATTGTGCCA TACTCAGCTT 540
AGTGAGAACT ACCTACCCCA CCCTGCCTTG CTCACAAGCC TACCTAAAAA TCAAGAAATA 600