EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-04934

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr11:116673570-116676670

Target genes

Number: 10
Name	Ensembl ID

Foxj1	ENSMUSG00000034227
Cygb	ENSMUSG00000020810
1810032O08Rik	ENSMUSG00000020812
St6galnac1	ENSMUSG00000009588
Mxra7	ENSMUSG00000020814
1110005A03Rik	ENSMUSG00000090266
Jmjd6	ENSMUSG00000056962
Mfsd11	ENSMUSG00000020818
Srsf2	ENSMUSG00000034120
Mgat5b	ENSMUSG00000043857

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr11:116673944-116673961	TACTTTCTATGAACTCC	+	6.08
Creb5	MA0840.1	chr11:116673911-116673923	AGTGACGTCATG	-	6.04
EBF1	MA0154.3	chr11:116675910-116675924	AGTCCCCAGGGAGT	+	6.06
EBF1	MA0154.3	chr11:116675910-116675924	AGTCCCCAGGGAGT	-	6.16
EWSR1-FLI1	MA0149.1	chr11:116674459-116674477	GGAAGCAGGGAAGCATGG	+	6.05
IRF1	MA0050.2	chr11:116676620-116676641	AAAAAAAAAAAGAAAGAAAAG	-	6.41
Klf1	MA0493.1	chr11:116675502-116675513	AGGGTGTGGCC	-	6.32
RREB1	MA0073.1	chr11:116673770-116673790	CCCCAAAACAACCAAACCAA	+	7.14
ZNF263	MA0528.1	chr11:116674397-116674418	GGAGGAGGGGGAGCAGAGGAA	+	7.82
ZNF740	MA0753.2	chr11:116673987-116674000	ATGGGGGGGGTGG	-	6.46

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04755	chr11:116671289-116676689	E14.5_Brain
mSE_09784	chr11:116673736-116677292	MEF

Enhancer Sequence

AAATAAAATA AAATAAAAAA AGCCAGAAGG TAGTGTCACG TGCCTCTGGA GTCCCAGCAC 60
TCAGGAGGCA GAGGTAGGTG AGTTTGAGGC CAGCCAGGTT TACCAAGAGA GTTCCGGGAC 120
AGCCAGAAAT ACACAAAGCA ACCCTGTCTC AAAACAACAA CAACAATAAC AACAACAATA 180
ACAACAACAA AAATCCAACC CCCCAAAACA ACCAAACCAA ACCAAACACA AAACAGAAAG 240
AAAGAAAGAA ATGGAAAAAG AAAAAGACCT GCTGTCAGAG AGGCCAACAA GCTACAATGT 300
TCTTGTAGTG GCCTGAGTGC ATCCTGGAGG CACCCCCACG CAGTGACGTC ATGTTCTCAC 360
CCCAGCACAT CTTATACTTT CTATGAACTC CTGTGGTTTC TTACGCCTTG GTCTTTAATG 420
GGGGGGGTGG GCACAGATGG AACTGAGACA GCCAGAGAGA AACTAATCCC TCTGCCATGC 480
CCTTCCATCT TCCAGATGAC ATTCCCTCTG CAGGCCAGGT TAAGCCAGCC CAGAGCTGTC 540
TGCCTGTCTG CGTCAACAGT CCAGCTGTTT GCCTGGGAGG GCTTCCTCTG CGCCACTGTG 600
GCCTCCCCCC ACCCCAGTGT GTGCTGATCA GAGCAAAAGC GGATACCATT CACATGCTGG 660
GCCCCAGGGA CTCAGGGACT CGGACCTTCC TTTTCTTCTC CTAGGCTTGG GACAGACATC 720
GGGGCCGTGG TGGGATGCAC AAATGCACAG GCTTGGCGGA CTGCCAGCAT CTGAGAGTAG 780
CCTCCAGTCC TGCAGACTAT TAGAAAGGCA GATCTGCAGG TCTGGCAGGA GGAGGGGGAG 840
CAGAGGAAGG CCAGGGCATG CATGCATGAG ACACGGCGTC CCAGCAGAGG GAAGCAGGGA 900
AGCATGGAGA GGCGGGGTGT CCTGATGTAA TAATCTGCTT GGAAGCAAAG CCTTCTGTGT 960
CCCTTAATCC AACCTGTATC TGAGACAAGA TGGCGGGCAG GCTGGCCAGC TTCTAGCTAA 1020
TGTCTGTTAA GGTAGACCGG CTGAGGGTGG CTATAGCCGG TGACGCTGGT GTCCCCTCTT 1080
CCAGCTGCTA TCCTAGAACT TTCTACTGCC TCCCGGAGAG TCTGAGACAC CTCCACTGTA 1140
GGTCAGGCCC CCGCCACTCG CACACGTCTT CAGATATACA GATGCTGCCA AGAAGGAAGA 1200
AAAGCCACTG GGGTTAGGAC TCTCACCTCG CCGAAAGGAA GGAGGTTCTG AAGATGAACT 1260
CAGAGCCCAA ACGTTCCACA GAGCCATGCT GTGCCTCATC AAGCCTCACT TAGGAGGACT 1320
GGGGTCCTAC CTAGCCAGCT GCCCAGGGCC CGAGGCTTTC CTCCGGAACC AATCTACTTC 1380
TTACAAGGAC CTGCTTTGCT CCTGAATCGC TCTACATTTA GAGAACACAG TTCTAGGTGC 1440
TCTGGTGACC AGACGACAAG TGTGCAGCTA ATGAAGACTC GAATCAGCAG CCGTTCCCTG 1500
GCAAGGGTGG TGGAGTGGGC GGAGTGGGTA GGGGGCTGAA AGAGCGCCGA TGGGGCGGCT 1560
GTGGTAGCGT TCGTCCATCT TTAGTCCCAG CACATCGGGG TGGGAAGAGG TAGGTCTCTG 1620
TGAGTTCCAG GCCAGTCTGG TCCACATCAA GTTTCAGGCC AACTATACAG AGGGTACAGG 1680
GTGGCATGCT GACTATGGGT GAGGGGGACA GAGGCATATT GGTCAATTGG GGTTTGCCTG 1740
GCTGTCGGGG CCCTTGCTGC GATGAGGCTG CAGCTCTGAG AGTCTGAAGT TCTTTGCCTT 1800
CTCAGAAACC CTCCGCTCTC CTCTGCAGCT CCCCAGCACA CTGGTCTGAA GCCTCACCAG 1860
GCTAATAAGC ATAGCCCAGG ACGGCCCACT CCATCTGGTC TAGTTCATAG GAACCAAGAG 1920
CTTTTCAAGT CCAGGGTGTG GCCGGAGACT GAGGAACTTC CCCGAGCAAC TGCAGTCTGC 1980
TGCCCAGGGC TGCAGCTCCT ACTGAGAAGG CCTTTGTTTA TCCCAGATCC CTGAATATCC 2040
TGCATGCCAG GGACAACAAC CGGGGCTTCA GCTTGCAAGC TGCCCCCTCG CTGGGCCCAG 2100
AAGCAGTACT GACAAAACCA AAGAACCCCG ACATCTGGGC AGCTGTGTTG CTGTTCTAGA 2160
AAAATAAACA CAAACGGCTC TGCCAGCTTG GTGCGCGCCT GGGTTCTGGT TTATGGGACA 2220
AGTCTGATTA GCCTGATGCT TTTCCAGCCT GCCAGGACAG CTGCCCTAAC GCAGGCCTTA 2280
ACTCAATCAC ACTCGGTGGG CCCAATCCAA TTTAGTTAGA GCCAGAGGGC CGGGTGTGAG 2340
AGTCCCCAGG GAGTGCGTGC AGGATGGGGG CTTCCTCTTC CAGGCATCAG GCCGCTTGGG 2400
GACGTCATTT TAGCAACACT AATCAATTAG CCTGGGAGGC TGAGCTGCTT CCAGCAGGGG 2460
GGCTGGCGGG CAGTCTCACT TCCTTCTAAC AGCTGAGACC GCTGGCCTTT CTCCCCTCTG 2520
CCTGGTTATA GATGGGAGGC CATGAATGTT GGGGGCTGTC CAAGGACAGA GGCTCAGACG 2580
AGTGGGAGGA CTCCGGAGCA GACATGTGGC CAGGCGGGCA GAGGGCTTGA CGTATGTGAG 2640
ACTGTCAGCG GAGTTAGGGA TGGTAGCCTG TAGGTGTGCC TGCTTGGTTT GCCCCAGTTT 2700
TAACCTCCCT TCTGCATGCT CCAGTCACCA GTAGGACTTT GGTAGCCACG CCAGCAGGGA 2760
CAGACAGACA GACAGACTCA TGGGACTGCT GTTAACTCCT ATCTCCATGA TTCAGGAGCA 2820
GAGAGCAAGG GCCTGGCTGG CCAGGTGTTG ATATCCCCAC CTACCTCTGC CCGTGCCTAA 2880
GGGGCTATGC CAACAGAAAC CCACAGCCCT GTTCTCCTCG AGAGGGCCTG GGGACTTTCT 2940
GGGCTCTGTA GCTAGCTCAG TTACCACATT CCTGAACCCA CTGCTTCCCA TGGAGCCTGC 3000
CAGCCAGCCA GCCGTTGGCT TAAAGCTGCA GCCAGTTCTG CTTTAAAAAA AAAAAAAAAA 3060
AGAAAGAAAA GAAAAGAAAA GAAAAAAGGA AAAAAGTATC 3100