EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-04603

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr11:102068990-102070040

Target genes

Number: 20
Name	Ensembl ID

Sost	ENSMUSG00000001494
Dusp3	ENSMUSG00000003518
Mpp3	ENSMUSG00000052373
Cd300lg	ENSMUSG00000017309
Mpp2	ENSMUSG00000017314
Tmem101	ENSMUSG00000020921
Lsm12	ENSMUSG00000020922
G6pc3	ENSMUSG00000034793
Hdac5	ENSMUSG00000008855
BC030867	ENSMUSG00000034773
Asb16	ENSMUSG00000034768
Tmub2	ENSMUSG00000034757
Atxn7l3	ENSMUSG00000059995
Ubtf	ENSMUSG00000020923
Slc4a1	ENSMUSG00000006574
Rundc3a	ENSMUSG00000006575
Slc25a39	ENSMUSG00000018677
Grn	ENSMUSG00000034708
Fam171a2	ENSMUSG00000034685
Itga2b	ENSMUSG00000034664

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr11:102069580-102069595	TGACCTGTTGATCTC	-	6.16
RFX4	MA0799.1	chr11:102069644-102069660	AGTTGCCAGGGCAACC	-	6.17
RFX5	MA0510.2	chr11:102069644-102069660	AGTTGCCAGGGCAACC	+	6.23
RFX5	MA0510.2	chr11:102069644-102069660	AGTTGCCAGGGCAACC	-	6.49
Tcf12	MA0521.1	chr11:102069317-102069328	CAGCAGCTGTT	-	6.32
ZNF263	MA0528.1	chr11:102069370-102069391	GGAGGAGACAGGAAAGGAAAG	+	6.21
ZNF263	MA0528.1	chr11:102069329-102069350	GGGGGAGGGGGAGAGAATGGG	+	6.22
ZNF263	MA0528.1	chr11:102069759-102069780	GAAGGAGGAAGTGAGAGAGGC	+	6.44
ZNF263	MA0528.1	chr11:102069367-102069388	GGAGGAGGAGACAGGAAAGGA	+	6.49
ZNF263	MA0528.1	chr11:102069364-102069385	GGAGGAGGAGGAGACAGGAAA	+	7.23
ZNF263	MA0528.1	chr11:102069357-102069378	GGAGGAGGGAGGAGGAGGAGA	+	8.39

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03036	chr11:102062179-102084603	TACs
mSE_10809	chr11:102067712-102070275	Olfactory_bulb

Enhancer Sequence

CATTCACTGT CCCCTGCCTT GTCTCCACCT TGTCCCAGAG GAGCAGAGAT CAGATCTGTG 60
GGGACTTTAC AGACAGCTTG CCCTCTGTGG GTCTGTCAGT TTCATCTCAG CTAGGGGAAA 120
AGAGGCTGGT TTGCGAGGGG GGAAATGCGA CAGGCATGAG GGGCACAATG GGAACAGGAG 180
GCCTCAGGGA AAGGGGGTGC AGGGCCGCAC CAAGCCAGGG ACAAGATGGG ACTGGGAGTC 240
AGCCTGGCTT CCTCTGGTGG ATTATCTCCT TTCAACAGTT TTATTGTAAT TACCCTGAAA 300
ATGCCGCTAT ATATAGAGTA AGCCAAACAG CAGCTGTTGG GGGGAGGGGG AGAGAATGGG 360
CGTGCAGGGA GGAGGGAGGA GGAGGAGACA GGAAAGGAAA GGGAATCAGA CAGGAAGAAG 420
AGTGATGGGG GGGCATTTTG GGGCCTGGAG CTGTAGCAAG GACCTCAGTC TCCCAACCAG 480
GGGGGCACCC CTGAAAAGAG AAGCGTGGTC GAGGGTGGTT CTGAGGTCCG CATGGACACT 540
GGACCGCAGA ATGGGAAAGG TTCCAACTGG CTTATGGGAA GGTTGGGTCT TGACCTGTTG 600
ATCTCCATGC ACTGCCCTCT GGCCACTGAA TGTCATTCCA CATCACTGCC CACTAGTTGC 660
CAGGGCAACC AGGCAAACAC CATACCAGCA GGGAGACCCA AGCCCAACCC ATACCCCACA 720
AAGCCACCCG CAGCTAACAG GAAGGGGAAG GCAGGGTACC ACTGCCTGGG AAGGAGGAAG 780
TGAGAGAGGC TGTACCACCA GCTCATCTTC TTTCTCCTCC ACTTCTCCAA AGAAAAAGCC 840
TACATTCCCT AACTCTAGCC TGGGAAGCTA CACAGGGACA GGAAGATGGT CCCCCAGCAA 900
AGTGGCCCAG GCAGTGCATC CCAGGCAGTG AGAAGACAGA ACCCTGATAT CCTGACGGTT 960
GCCAGTGCTC AGGGCTCTTC CCATCCCCAC TCCCCTACAC CTGAGCCTAC ATCAAGAGTG 1020
GGAAGGGTAT GCAACGGTGG CGACTAAAAC 1050