EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-04189

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr11:86641650-86642350

Target genes

Number: 13
Name	Ensembl ID

Rps6kb1	ENSMUSG00000020516
Tubd1	ENSMUSG00000020513
Ptrh2	ENSMUSG00000072582
Cltc	ENSMUSG00000047126
Dhx40	ENSMUSG00000018425
Ypel2	ENSMUSG00000018427
Gdpd1	ENSMUSG00000061666
Gm9378	ENSMUSG00000082507
1200011M11Rik	ENSMUSG00000020495
Prr11	ENSMUSG00000020493
Fam33a	ENSMUSG00000020492
Trim37	ENSMUSG00000018548
Gm11490	ENSMUSG00000080976

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr11:86642221-86642233	TGCAGTGATTTT	-	6.11
RREB1	MA0073.1	chr11:86641774-86641794	CCCCCAAACACACCCCCAAC	+	6.91
RREB1	MA0073.1	chr11:86641776-86641796	CCCAAACACACCCCCAACCA	+	7.02
ZNF263	MA0528.1	chr11:86641666-86641687	CCTCTCTCTTTCCCTTCCCCC	-	6.03

Enhancer Sequence

TTCTACTCTT ATTCTCCCTC TCTCTTTCCC TTCCCCCACC TTTTTCTTGT TTTGAAACAG 60
GGTCTCAGGT AGCCCAGGCT GGCCTAAACA TCACTGTGAA CTGAAGGGTC ACTCTTACCC 120
CTCCCCCCCA AACACACCCC CAACCAGAGC CTGAGATTAC AAGCTCATAC CACACCACAC 180
CTAGTTTCCA ACTTCTTTCC TTCGAGTATC TCATTGTGTA GCCCAGGCTG GCCTCGAATT 240
CAAGCTCCTT CTGCCTCAGT CTTCTGAGTC CTGGGGTGAC CAGTGTGCCC ACTACACACA 300
GTCTCAAAAC TCGAGACTGC AGCACCGTGT CTGTGAACTT CTTTTTCTAA GCTTTGTTCG 360
TGACAATGTT TGGAAAGAAT TCAAGTATGT GTTTCCAGGG GCAAGTCATC TTAACACACT 420
GTGGGGGTAG GCTGCATCCT GTAACCCGGC AGAGTGAAGT AGGTTTTTAT CACCAGGCAC 480
TTAAAAGAAT GCCACAATAA GAATGCTTAA CTGATGTTAA CACATCCGGC TTTTGGGCTG 540
TGATGTTCAA AGCCACTCAC GTTAGATCCT TTGCAGTGAT TTTTACTTTG TCCAGAAGCT 600
TTGAAGGTCC TTTTGTGTCT GGCATTGTGA AGCTCCTAAA ACAGGGGACT TTGTTATCTT 660
TATTCCAAAT TCTGAGTGCC TTTCCTTCTG GAAATTAGCA 700