EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-03786

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr11:69474930-69475970

Target genes

Number: 31
Name	Ensembl ID

Kdm6b	ENSMUSG00000018476
Efnb3	ENSMUSG00000003934
Trp53	ENSMUSG00000059552
Atp1b2	ENSMUSG00000041329
Sat2	ENSMUSG00000069835
Gm12308	ENSMUSG00000083485
Gm12309	ENSMUSG00000083300
Fxr2	ENSMUSG00000018765
Sox15	ENSMUSG00000041287
Mpdu1	ENSMUSG00000018761
Cd68	ENSMUSG00000018774
Eif4a1	ENSMUSG00000059796
Senp3	ENSMUSG00000005204
Tnfsf13	ENSMUSG00000089669
BC096441	ENSMUSG00000018752
Polr2a	ENSMUSG00000005198
Amac1	ENSMUSG00000018776
Zbtb4	ENSMUSG00000018750
Chrnb1	ENSMUSG00000041189
Fgf11	ENSMUSG00000042826
Tmem102	ENSMUSG00000089876
Nlgn2	ENSMUSG00000051790
Plscr3	ENSMUSG00000019461
Tnk1	ENSMUSG00000001583
Kctd11	ENSMUSG00000046731
Acap1	ENSMUSG00000001588
Gps2	ENSMUSG00000023170
Eif5a	ENSMUSG00000078812
Slc2a4	ENSMUSG00000018566
Gabarap	ENSMUSG00000018567
Acadvl	ENSMUSG00000018574

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr11:69474956-69474971	GCTGTCCTTGAACTC	-	7.06
PROX1	MA0794.1	chr11:69475190-69475202	GAAGGCGTCTTG	-	6.27
ZNF740	MA0753.2	chr11:69475624-69475637	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:69475625-69475638	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:69475626-69475639	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:69475627-69475640	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:69475628-69475641	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01268	chr11:69475516-69496723	Th_Cells
mSE_11858	chr11:69474933-69480491	Placenta

Enhancer Sequence

GTATTGGAAC TCATCCAGTT GCCTAGGCTG TCCTTGAACT CCCGCCTCTG GGTCCCTCCC 60
AAGGGCTGGG ATTAAAGGTG TGGGCCACAG TTCCTGGCAA TTTCTCTAAT TTTTTTTAAA 120
AAACATTTTT CTTTCAAACC CTGTGTCCAG GGCTGATTTT CAATAGATTG CAGCGAGTGA 180
GCTGAGCTGC TGCCTACAAA ACCCTGATCC TGGCAATCTC TCTACCACTG AATCTTTGAC 240
CTGGTGGGCA TTTGGCCCAG GAAGGCGTCT TGACTATTGT AAGCCAAAAG TCACTTAGAA 300
TAGAGAGATG GAGAAGGCTT ATCAAAGGCC TTTGTAAAGA AAAAGGAAAG GAAAAGTGCT 360
ATACTCCCAA CACTCTAGTG ACTGAGGCAG GAGGACTGTT GCCAGTTCAA GGGCAGTCTG 420
TGCCACATAG TAAATTCCAG AAGCTGGTGC TGGAGAGAGG GGATAAAAAA AAAAATTTGT 480
GAGCCTCTGT CAGTTGAGTG CTTGGGGCGA AAGGAGGCCT ACATGCCTGG CTGGGGTTTT 540
AATTTTGTTT TATAAAATAC GAGTTTTCCG CCGAGGATTG GTGGCACACA CCTTTAATCC 600
CAGCATTTGG GAGACAGAGT CAGGTGGATT TCTGAGTTCG AGGCCAGCCT GGTCTACAGA 660
GCGAGTTCCA GGTCAGCCAG AGCTATACCC TGTCGGGGGG GGGGGGGGGG GTACGACAAA 720
AAAGCTCCGA GTTTTCCAGC CTGGGGCTAG AGCCTGGTTA GCAGAGTAGC ACATGCCGCC 780
CTGAGTTCGA CTCCCAGCCC AGAAAGGGAT GAGGGTTGGG TACAGACTTC CGAGATTGTA 840
AAACACAAAT TTAACTTTTT TTCGGGAGAC ACCCCTTCAT GCCCAAATAT GGCACTTTTC 900
CTATGCAGGG CCCCAAACAC TTCCGCCCTC GTCAGAACCG CCTTCTGCCC AGCTTCGCGG 960
TGACATTAAT CGCCACTGTC ACGCCAACTT ACGGTTCAAG GCTGCTCCAG CTAGACCTTG 1020
AAGGCTGAAA TAAAACTCAC 1040