EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-01330

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr1:172968150-172968840

Target genes

Number: 18
Name	Ensembl ID

Atf6	ENSMUSG00000026663
Dusp12	ENSMUSG00000026659
Gm2962	ENSMUSG00000089838
Fcrla	ENSMUSG00000038421
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Ndufs2	ENSMUSG00000013593
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata4	MA0482.1	chr1:172968577-172968588	AAGAGATAAGA	-	6.02
SPIB	MA0081.2	chr1:172968566-172968578	GATGCGGAAGTA	+	6.14

Enhancer Sequence

GGGTCAACTG CTTGGAAGGC AGCTATGCTC ACCACTATAC CACCAACGCA GCACGGCGAC 60
CGCTTTCGTT TCGTCTCTTT AATAGAAGGA AGAAATTTAC TGAGCATGTT TGTATCTGTT 120
TTCCGCAAAT TTAAAAATGG ATTCCGTGAG AAAATTCGGC GTCAACCCAG AAGGAAATAT 180
TTCCTCCGCT TCTCGCCCTG TTCACCGCCT GACGTTCTCG GTTCCAGGCT CCGCAAACGC 240
TCAGCGCCTC CAGGCAGCTC CCAAAGTCCA CCCGGCACCG GTTCCATAAG CGACTTAGAA 300
CGACCGGTGG GGAGGAGAAC TGGTCGCTAA GAGATCATCT GCGGCCTGAC TCGGCCCCTC 360
TGATAAAAAG AAAACCGAAA GGTCCCAGAA GAGATGGATG ATGGAAGGTT TAAAGAGATG 420
CGGAAGTAAG AGATAAGAAA GATCTGTCCG CTACTTTCAC TTGTTTTGCT TTGCAAAAAC 480
GTTCCCGGAG AGTTCGTGTT TCTTTTTATC TGGAGAAATC ACAGATGGCG GCGTCATCGC 540
CATTTAAGGG TATTAAAGCC CTTATAAAAA TGTATGAAAG CCACACTACC ATGTGTCAGG 600
ATGGCCGAGC GGTCTAAGGC GCTGCGTTCA GGTCGCAGTC TCCCCTGGAG GCGTGGGTTC 660
GAATCCCACT TCTGACAAAT ACTTTTTCCT 690