EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-01329

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr1:172890010-172890580

Target genes

Number: 10
Name	Ensembl ID

Atf6	ENSMUSG00000026663
Dusp12	ENSMUSG00000026659
Gm2962	ENSMUSG00000089838
Fcrla	ENSMUSG00000038421
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Dedd	ENSMUSG00000013973

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr1:172890036-172890047	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr1:172890037-172890047	TCAAGGTCAT	+	6.02
Nr5a2	MA0505.1	chr1:172890033-172890048	GAGTTCAAGGTCATC	+	8.03
Stat6	MA0520.1	chr1:172890080-172890095	GACTTCCTGAGAACT	+	7.55

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01610

chr1:172883085-172907776

Macrophage

Enhancer Sequence

GGAGGTGGGA GTAGCAAGAT CAGGAGTTCA AGGTCATCCT TCAGTTACCA CTGGCTTTCA 60
TCCAAAGTTT GACTTCCTGA GAACTCCTGT TACATAACAA AGTGATTACT CTGTTTGTCA 120
TAGGAGAAAA GAGAAGAAGG AAGTGGAAAC AAAAAGACAA GTTCACTGGA AGCATGTTCA 180
GTTTGAAGGG AGGGGCACTG GCCCTCTACT CCAAATCCCT GTCTGTCCTC TCCTCTACCT 240
CCTATCTACT GCTACCAGGC CAGGTGTGGT GGTGGATAGT CGTGCATGCT CGTTATCCTG 300
GAGGTCTAAA GGCACAGGCT TCAGGACTGG GAGTTTGAGG GAGACAAACT AAAGAGGGGG 360
TGGGGGGCCA TCTATGTGGC TGTAAAGACG TCATTGGTGC TAAGACTGTT GTTATAAGAT 420
CTTCCACACC CCTGAAAGGA ACCCTTCACT CATGTCCCCA CAAATAAGCT GGATAAACTC 480
ACTGGTGCAC CAAACTAGAC TTGAGTGTAA TCATATGACT TTGGTCTGTC ACGAGGGCTC 540
TACCTAAGAC TCTTATGTCT CCCCAGGGGA 570