EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-00963

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr1:137324530-137326840

Target genes

Number: 9
Name	Ensembl ID

Ppp1r12b	ENSMUSG00000073557
Elf3	ENSMUSG00000003051
Rnpep	ENSMUSG00000041926
Timm17a	ENSMUSG00000062580
Lmod1	ENSMUSG00000048096
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879
Nav1	ENSMUSG00000009418
Csrp1	ENSMUSG00000026421

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr1:137324561-137324572	CTAATCCTCTT	-	6.62
SOX10	MA0442.2	chr1:137326197-137326208	AAAACAAAGGA	+	6.32
STAT1	MA0137.3	chr1:137326332-137326343	TTTCTAGGAAA	+	6.14
Sox3	MA0514.1	chr1:137326197-137326207	AAAACAAAGG	-	6.02
Stat6	MA0520.1	chr1:137325945-137325960	ATTTCTGAGGAAGCC	-	6.25

Enhancer Sequence

TTTTACAAAC TCTGCTAATC GAACTCAAAC TCTAATCCTC TTAGGAAAAA GGGGACAATT 60
GTCTGCTGGC TACCACACGA CTCCGAGTGA CACTCAGTGA CAACGAGGCT CTAACTATGC 120
AAAGTCTGCA GGCTCCCCTA GATCCCAGTG CTTAGGGACA GGGCAAGAGC AGGAGCTCAA 180
GAAACATTTT CATTACAGAA ACAATTTCCT CACCATCCAG GACTAAGAAG CTCGTGAACT 240
CCCCCTAGGA GACCAGGTGC TGTCATTTCA TGTAAAGAAG GGCCACAGCC AAAGAAGCTG 300
TTAGAAGCGA ACCTTTAGAA AGTATCTCAG AGTTAGCCAG TATGTAAAAT TGGAGATGCT 360
CAGGACCCAA TGGGAGAGAT TACTGTTAAA GACCCCTCCC GGAAAAGACT CTTAAGGAAT 420
GAACCACTAT CCTCTAAATA AAAACAGGTA TAGAAGGGGA CAAGACTATT TTAAAGCCAC 480
TGAAGACTAT TTTAAAGCCA ATATTACTAT ATTCAACTCC AGACTTGATC CACCTCTGTA 540
ACCACATTCT GTACTTGAGT CATATACCTC ACTACCAGCC GCCATTCCTG TTACTGTATC 600
AGAGCTTGCC CCTGCCTCTC AGCAGGCCAC TCACACATTA TCAGTAGGTT ATGGGGACAG 660
GAGGGAGAAC TGAGGTGGCC TTTATCAATT TACTCATCAG TGATCAGATC GAAATTCTGT 720
ACTTTTGATT TCAAGATCCC AAAAGGTAAC AAGAGTAGGT GACAAGAACT TCAAAACGAT 780
CTCAAGGACG GTATAGGTGG CTGTGCCCTA GATGAGGCCA TAGCATCTGG CTATGAGTTG 840
AAGAAGAAAT CAGAGTAAGA CTAGAACTAT TGTACAGTCT AAACATAAGC CGGCCTTTCA 900
CAGTTAAGGT GACAGCCATA CATTTGGGAT TAGCTCAAAC ACTGGGTATC ATTCATGGGA 960
GGTTTAATTA AGGATCGGTT TGCATCAGCC CAGCAACTAA ATGCAAGTAA CAAGTTAAAC 1020
TTAGTAAGGT TTCTGCCCAT CAGCGTTCTT TCTTTATACC GAGGGAGGCA GAGGCATGAA 1080
CTGTAAAGTC AAGGAATTTG ACCTAGAAAC CTCAGGACAA GTTAGTTATG TGCTTCGTTC 1140
CAATAGCTTT CTTCCATTCA CGGTTCCCTC TCTTAAGAGT CTGGTAATGT TATAAAACTA 1200
CACCTGGCCT TTCAAAATAG TCTCTAACCT ATTAAATCCC AATAGTCCCA ACAGAAGGAA 1260
ACTTGCCTTC AATAGTTGGT CATATTAGAG GATATAAAAA CTAAATTCAA GGGAGGTTCC 1320
CCCACCACAT CCACTTCTTT TCAATAAAAA GTCCTGCAGG AGTATTAACT CAAGGCTTTG 1380
AGGGTGGTTG GTCAAATATG GAAACAATCT CCCATATTTC TGAGGAAGCC TAAGTTTAAG 1440
GAGCAGTGGA AATATTCCCT TGAGCTTGGG GATTCCGAGG ATCTGGAATT CCGAATCAGG 1500
TACGTTTCTT ACATAAAGAC CAAGGAGACT TGACCCTTTT TTCTGTTCTT TGTGAAAACA 1560
GGCCCGCTGA AAGCCCACTA AACAGGAAAT TAAAAGAAAA CGTCAAGCTA ATAGTTTCTT 1620
CTCTAACACG TTAAAGAACA TAACGGGAGG ATGAGAACAA AGAATCTAAA ACAAAGGAAG 1680
ATCGGTTCCT GTACATAGAA ATGCACAGTA ATTTAATAAT TGCCATTAAG TCTTTAAAAA 1740
ACAAAAAACA AACGGGAAGC ATGGTCGGAA AGTGAAGCGT CGTATGCATC GGATTGAGTT 1800
GATTTCTAGG AAAACGTGAT GTGTCTGAAC AACCAGCCAG ATTTAAAACT CTGATGCTGA 1860
AACTTGTTCG ATGGTGGCCG CCTCCTTAAG GGCCTTACTT CTGGCTCTTC TCTAGCTCCC 1920
TTCCCTGATC CCACTACAAC AGAGCTGGTG AAGAAAACGG CAAAAAGACC TTGTCTTGGG 1980
CTCAGAGATC ATCTAGATTG CGCGACACCG CCAGCACCAC GTCGAACTTC ATTTCTGTCC 2040
TCGGCAGAAC CCCGCCACTA TCTATCTATC TTTTCAAGTC TTCCCCCACC CCATCCCCGC 2100
TAAGGCTCCA CCTCCCCCGA CCCTTTCCTT TCAGACGCGC CACCCTTCTT CTAGGACTTT 2160
CCCAGCCACC AGCGGCACCC CCACCCCCAC GTTTCCTAAT CCACTCCTGA CGCCCACCTC 2220
TCCGCTGGCT CAAGATCCCC AAATCCCTAC GGTCAGCGGA CTGTGCGGCC GGCCCTGGTC 2280
CGAACCATCC TCGTGACGGT CCCGCCTCAC 2310