EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-00815

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr1:132637760-132638200

Target genes

Number: 10
Name	Ensembl ID

Cd55	ENSMUSG00000026399
C4bp	ENSMUSG00000026405
Yod1	ENSMUSG00000046404
Pfkfb2	ENSMUSG00000026409
AA986860	ENSMUSG00000042510
Fcamr	ENSMUSG00000026415
Pigr	ENSMUSG00000026417
Faim3	ENSMUSG00000042474
Il24	ENSMUSG00000026420
Mapkapk2	ENSMUSG00000016528

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr1:132638079-132638090	GGGAGATAAGA	-	6.62
NFE2L1	MA0089.2	chr1:132638027-132638042	CAATGAGTCAGCATA	+	6.2
Nfe2l2	MA0150.2	chr1:132638025-132638040	GACAATGAGTCAGCA	+	6.47
RUNX1	MA0002.2	chr1:132637883-132637894	TTCTGTGGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06245	chr1:132635957-132643272	E14.5_Liver
mSE_07795	chr1:132635681-132638223	Intestine

Enhancer Sequence

GTAAGAGTCT GTCAGGGAAG CAGCACTCGG AAGACCAGAG TCTCCTAAAC ATTTCCCAGG 60
CAGAAAAGGG AGCCCTGTGC TCTCCTAGCC AGACTCAAGA AGAGGCTTCC TGAGAAGCCA 120
GCGTTCTGTG GTTTTATACC AAGTAACAGA GACCTCGGAA GGAAAGGAGT TTGCCTGGCT 180
CCCTTCCGGT CAGGGAAGAA CTTAAAAAGT GATAGGCTAC CTCATGTACT GAGGAGTCAG 240
GGAGGCCTAA GCAGTTGGCC CAGGAGACAA TGAGTCAGCA TAGGGGAGCT AATCTGGGCG 300
AGCCAGAGAA CAAGACTGTG GGAGATAAGA GAGGGGTGCT CCAGCGGTAT GTGGTACCTT 360
GAGGCCCCTG TAAAGAGACA GCAGAAAGCC TGTGGAGTCC CAACTCAGTA AAAGAGCATG 420
GGGTGGCACC CAACTGTGCG 440