EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM097-00602

Organism

Mus musculus

Tissue/cell

Lung_E14.5

Coordinate

chr1:94687320-94688340

Target genes

Number: 3
Name	Ensembl ID

Gpc1	ENSMUSG00000034220
Capn10	ENSMUSG00000026270
Gpr35	ENSMUSG00000026271

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:94687808-94687818	GGGGCGGGGC	-	6.02
Myog	MA0500.1	chr1:94687383-94687394	GACAGCTGCAG	+	6.62
SP2	MA0516.2	chr1:94687805-94687822	AAAGGGGCGGGGCTGGA	-	6
SP4	MA0685.1	chr1:94687804-94687821	AAAAGGGGCGGGGCTGG	-	6.21
Tcf12	MA0521.1	chr1:94687383-94687394	GACAGCTGCAG	+	6.14
ZNF263	MA0528.1	chr1:94687791-94687812	AGGGGAGGGGAAGAAAAGGGG	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00633

chr1:94672425-94687589

Myotubes

Enhancer Sequence

GATGCAGCAG GAGCAGGAAG ATGTCAGACA GTCCAACAGA AAAGCGAGGA TATTTTAACC 60
CAGGACAGCT GCAGGGTGTG TTGCCAGGGG TAGAGTGTGT TGGGGGTGGA GGCAGTGCCC 120
AAGGCTCTAT TGCCCCCAGA CGCCCTTGGT GCTGTGAAGC CGGCCATCAC CCACACCCCC 180
TCAGCTCCTT GGGAGGTGCT CAACTCACAG AACCCTCTTG GCATTAGTTC TTGGGGACGA 240
GAAACAAAGA CACTGCCATG TGTGCCTCAG AGCACCTCCT GAAGGAAAAC TCCCGTTCCA 300
CAGCACAAAG TCGGCATGGG AATCTCTGGC TATACCTCTG CCCTTTGTGG AGTTAACACG 360
GCTTCTAGAC AGTGTGCCAC AGTGATGGCA GGAATGCTGC AGAGAGAGGA GCTGCAGGTA 420
AAAGCAAGAC AGAGGGCCTT GGAGAGTTCC GCCCGGCCTC TCGTCCAGGA AAGGGGAGGG 480
GAAGAAAAGG GGCGGGGCTG GATACAAAGG AAAAAAGGGG GTGGGGCTCA ACCTTGAGTG 540
TCTTGAATGG TGAGCCTAGC ACAGACCTCT CTCCAGCAGC GTGCAGTGAG CAGTCCCCCT 600
GAGAAATTAA AACACTGGAG CAGAGGGCTT CAGGTCAGAA TGTCGCCTGC CCTGCATGCC 660
TCATAACCCC AGCCCCCATT CCTGGACCCA GACCCCAGTG AGGATAAGAA CCAAACACTG 720
CCTATCTGGA GGGGCAGACA ACACGTGGGA GCTGGCGTCT GGAGGACTGA TACTAATTAG 780
GAGGGGGAGC CAGACAGGAA CCTGAGGGTC TGTGAGCCAG ACCTGCAAAG CCAGGAACCA 840
CTCATTCCCA GATGCTGCCT GCTGCATGTC CCCTCCCTGT TCAGTACCCA GTCACATACC 900
CCACCCAGTT GGCCTCTGCC CCCATGCCTG CAGAGTGGCC CTAACACCTT CAGCCTGCCA 960
GCAGCAGCTA GGTACAGGAC CTGAGCCAAC ACCAAAGGGA TAAAAAAAAC CTCTGCGAGG 1020