EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-15642

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr7:53128470-53129120

Target genes

Number: 19
Name	Ensembl ID

Nucb1	ENSMUSG00000030824
Rasip1	ENSMUSG00000044562
Fut2	ENSMUSG00000055978
Ntn5	ENSMUSG00000070564
Car11	ENSMUSG00000003273
Dbp	ENSMUSG00000059824
Rpl18	ENSMUSG00000059070
Sphk2	ENSMUSG00000057342
Fam83e	ENSMUSG00000054161
Spaca4	ENSMUSG00000070563
Sult2b1	ENSMUSG00000003271
Grwd1	ENSMUSG00000053801
Grin2d	ENSMUSG00000002771
Kdelr1	ENSMUSG00000002778
Syngr4	ENSMUSG00000040231
Tmem143	ENSMUSG00000002781
Emp3	ENSMUSG00000040212
Ccdc114	ENSMUSG00000040189
Nomo1	ENSMUSG00000030835

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr7:53128478-53128492	GCCCCCCCGCGGAG	+	6.37
RARA(var.2)	MA0730.1	chr7:53128592-53128609	GGGTCACCAGGGGGTCA	+	6.22
ZIC3	MA0697.1	chr7:53128478-53128493	GCCCCCCCGCGGAGA	+	6.02
ZIC4	MA0751.1	chr7:53128478-53128493	GCCCCCCCGCGGAGA	+	6.24

Enhancer Sequence

GGTGAGAGGC CCCCCCGCGG AGAGGGGGCG GGAGCGGGCC GCTCTGGGGC ACCGGGAAGG 60
CTGGAGCTCG GCAGGTCAGA GTCCTCCCGG ACTGCCTGCT GGGGATCACT TTTCTAGTTC 120
TAGGGTCACC AGGGGGTCAG CTCCTTTCCC TAGACTAAGG GGTACACATA GTTTGGTGGG 180
GGTGGCTTCG GGCGTTCAGT TCAACCTTCT GCAGCACCCT TTGGGACAGC TCTGGGTGTT 240
CCGGGGCTGG GAACCAGGAG CCATGGCAGG CGGGGAGGTG GCTGGGAGTT GGTGACGTGG 300
ACTGTGGAAG GCCAGGAAGG GAGCGGGAGG AAGGTGACCG ACTGGGAGGC TGAAGTCAGG 360
CAGGGCTCTC CCTAGGTCCC AGTGTAGGTC TAGACTGTCA GGAGGACCTG AGGGAGACAG 420
AAGGACCGGC GAGGCCTAGC CTGGGATAGA GCCTCGGTCT CTAGTATTTT TGGAGCCGGC 480
TGCCCCCTGC CTGTGGATGG TGGAAAAAGG GCCGAGCTCA GGCTTAAAGG CCTTGGGGAA 540
TCGCTGTGGT CTAGAGCTCC AGCCGGCTGG CCCAGGCGCT GCATGTTAGT TTATTATTGC 600
CCCAAGTAGC CCACCTCCAG CTCCCTCCAC CCTGCCCTTC GTTCTCTGTC 650