EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-11370

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr3:89083560-89084710

Target genes

Number: 20
Name	Ensembl ID

Dap3	ENSMUSG00000068921
Fdps	ENSMUSG00000059743
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Adam15	ENSMUSG00000028041
Dcst1	ENSMUSG00000042672
Cks1b	ENSMUSG00000028044
Pygo2	ENSMUSG00000047824
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TEAD1	MA0090.2	chr3:89084377-89084387	ATGGAATGTG	-	6.02
TEAD4	MA0809.1	chr3:89084377-89084387	ATGGAATGTG	-	6.02
ZNF263	MA0528.1	chr3:89084017-89084038	CCCCCTCCTCCCCCCGCCCCC	-	6.16
ZNF263	MA0528.1	chr3:89083667-89083688	GGAGGTGGAGGAAGGGAAAAA	+	6.52

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_07064	chr3:89080739-89086158	Heart
mSE_07305	chr3:89080835-89086397	Intestine
mSE_08273	chr3:89079886-89086258	Kidney
mSE_08351	chr3:89078790-89086622	Liver
mSE_09332	chr3:89080019-89086237	Lung

Enhancer Sequence

TCTGGCCTCT TCGCTGCTCG ACTCCGCCTT TTGGGCTGGC GCCGCCAACA CCAGCCCCGC 60
CCTCGCCCCG CCCGACGCGC GCTGCCCCAG GGCTTGATGG CTACGTTGGA GGTGGAGGAA 120
GGGAAAAAGA CTCTGGGAGG AAGGACTCCC ATATCTCAGC GACGGAGAGC GCTCCGGGGT 180
CTGCACAGAT CCTCCCATAG CTGTGTGTGC TCACTTACGG GTGTGGGGGT GGGGGTGTCT 240
ATGTGAGGCT CTGTTGGCTT TGTGGGACTG AAAGCCATAG CAAGCTGGAA AAATGGAAGA 300
ACTTATACGT GTGGGTCTGG GAACCAGTGG CTTCAGGACT TGGCTTTGCA GCGCGGGGCG 360
CCAATCTTGT CAGGGTGTGA GGTGGGGGGA TATAACCACA CCTTTCCTGA GATTCACACC 420
CAGGCCCGCG CACTCGCCTT CTCACACTCT CTCGTGACCC CCTCCTCCCC CCGCCCCCCC 480
AGCAACACTC CCCCATGCCT TGACTCTGGC TTGGCTGCCC CTCCCCACAC AGACGCGGCT 540
GTTTGTTTTT GTTGGGTTTG TCAATGTTGT CTTTGTTCAA GAGATTGTGT CATCGCTTAG 600
ATGCCGGGAA TAAAGTGCGA CGTTGTGTGT GATCGAGCGT GTAACGTGTG CGGCCAGGGC 660
TAAGGGCTAC TCAGTCCATC AGTACTTTAT GCGAGAACTC ATAGTTGGGC TCAGGGGCTG 720
TAGGGGGGGA TGTTCCTAAT ATTTTCAATA GCGCCAACGT ACGCTAATGA CCTGTTTATA 780
CATTTCACGT GTGTCTTGAG CGAATGCGCG CTTGCAGATG GAATGTGGGA ATATGGTCAT 840
GAAGAGTGAC AAACTAACCG ACCTGACACA TGTACATATG GCGTGTGTAA ATGCGTGTGA 900
TGGCGGGTAG GTGTAAAGAC ACTTGTGTGT GGAAGCGTGT GAAACGCCTG ACATACATAT 960
GCTAATGTTT GTGAACAGTG TGTGAAGAAG AGGAGAAACG TGTTTGGGCG TGCAGCGGGG 1020
GTGGATTGGA GTGGGGGGTA GTTTGGGCGG CTGTGTTTGA CTGAGTCTGA CTTGGGTCTT 1080
CCAGTCGGTG GGCTCTCAGT ACCAGGCTCA GAACCCCTCC CCCTCTCCAT GTAAACAACC 1140
CTGCAGGAAT 1150