EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-09739

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr2:32348800-32349490

Target genes

Number: 18
Name	Ensembl ID

Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Lcn2	ENSMUSG00000026822
Ptges2	ENSMUSG00000026820
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013
Rpl12	ENSMUSG00000038900

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr2:32349460-32349470	TTTAATTAGA	-	6.02
Myog	MA0500.1	chr2:32348909-32348920	GACAGCTGCAG	+	6.62
Tcf12	MA0521.1	chr2:32348909-32348920	GACAGCTGCAG	+	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01404	chr2:32342475-32443798	Th_Cells
mSE_07559	chr2:32349050-32349899	Intestine

Enhancer Sequence

GAGAAGGAAC CAGTGATGTA GTACCAAGTT TCAACCTTCC TTCCACAGTG GGTGAGGGCA 60
GGGGGGATGG GCAGGGAGTG GGTGCATGGA GGCCTCCTTT AGCTTGTTAG ACAGCTGCAG 120
CCTGGCAGAC AGCACGGTGT GGAAAGAGGT AGGGTGAATG CAGATTGCGG TAGAGACAAA 180
TGTAGCGAGA GAGGGGGGTG TGGGCTCATT TCTTAGAAAT ATGAAATACG CAAATGCTAG 240
AGAAAAAAGT TAGCTCCATG CAGAGAGAGG ACGCTGCTGG GAGCTGCTGG GCGGGCGCTG 300
ACAGGTAGGC AGGAAACTAC CGGATGGCTA ACAAGTTCAT TGCTCTCTTC CTGCGCAGAC 360
CACAGCTCAC GGATTCCAAG AGAGGCTCAC TTCCTCGGCA TTAGCACGTC CTGTGGCATG 420
GCAGGGTGTG TCCCCTCCAA CAGCTGGTGG CACACCTGAC AGCTACCTTT GTGTGTTTTG 480
TGTGTGTGTG TCTGTGTGTG TGTCTGTATG TGTGTCTATA TCTGTGTCTA TGTCTCTATG 540
TCTCTCTCTC TCTCTCTCCT TGTGAGTGTG TGTGTCCGTC CCCCTGTGAA GAGTGTGGAA 600
ACAAGAAGAC AACCTTGGGT GCAGTTCCTC AGGGTCTCTC ACTGAGACCT GGGCTGGCAT 660
TTTAATTAGA TTCTTTGGCC TAATTAACAG 690