EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-08994

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr19:7000860-7001580

Target genes

Number: 12
Name	Ensembl ID

Trmt112	ENSMUSG00000038812
Prdx5	ENSMUSG00000024953
Esrra	ENSMUSG00000024955
1700019N12Rik	ENSMUSG00000050623
Kcnk4	ENSMUSG00000024957
Plcb3	ENSMUSG00000024960
Ppp1r14b	ENSMUSG00000056612
Vegfb	ENSMUSG00000024962
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NRF1	MA0506.1	chr19:7001536-7001547	GCGCATGCGCG	+	6.02
RXRB	MA0855.1	chr19:7000943-7000957	TGACCCTTGAACCT	-	6.33
RXRG	MA0856.1	chr19:7000943-7000957	TGACCCTTGAACCT	-	6.36
Rxra	MA0512.2	chr19:7000943-7000957	TGACCCTTGAACCT	-	6.17

Enhancer Sequence

CCCATCTGCA CAGAGAGGAA AAGGGGTCGA CCCATTGCAG CTCCGAAAGC TGCCCTTTTA 60
CCAATTGCAT CCACCTTTTT GCCTGACCCT TGAACCTCAG CCTGTGGATG ATCCCAGAGC 120
CACACTGTCC CTTCCTGCAT TGGCCCAAAA GCACTCCCTT CTCTAGGAAC CTTTCTTGAA 180
AGCCTCGGGT TTGTTTCAAC CTTCACTGCC TCTCTGTATT TGGCTAGCAA AATGCAGATA 240
AATTACAAAA CCAGGACGAC TCATGCAATA TTTGGGACAT AGCTTAAAAT CGTATTCGTT 300
GTTCATCTGA AATTCACATA TAACTGGCCT TTCTAGTTCT GTTGTTTTTG AAACAGAGTC 360
TCATTCTATA ACCCAGGCAA GTCTAAACTC GCAGCAATCC TCCTGATTCT GCTCTGCTTA 420
CAAAGTGCTG GGATTTACAG ACATGTACTA CCTACCACCT TGCCTCTCTG AGTTCTTATT 480
TGCTAACCCT GACAGCCCTA TCTATCCACG AAGAACGAGG TGGTTGAGTC TCTGACAAAC 540
CTGAATTTAC TCCAATGTTC CCGTTAGCGC ACCGTCCGGG TCTCAATGTC AGAGAAGCCC 600
ACATTTTGGA AGGGAGCCAG ACTGGCCAAC AACCCCTGTG CCCGGGGATA AGGGCACAAC 660
ACAAGAGACA TGCATGGCGC ATGCGCGGCA GCGAACAACT CCTGGAACAC GTAGAAATAC 720