EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-08971

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr19:5921820-5922840

Target genes

Number: 20
Name	Ensembl ID

Kcnk7	ENSMUSG00000024936
Ehbp1l1	ENSMUSG00000024937
Fam89b	ENSMUSG00000024939
Sssca1	ENSMUSG00000079478
Ltbp3	ENSMUSG00000024940
Frmd8	ENSMUSG00000024816
Slc25a45	ENSMUSG00000024818
Tigd3	ENSMUSG00000044390
Dpf2	ENSMUSG00000024826
Cdc42ep2	ENSMUSG00000045664
Pola2	ENSMUSG00000024833
Capn1	ENSMUSG00000024942
Fau	ENSMUSG00000038274
Znhit2	ENSMUSG00000075227
Tm7sf2	ENSMUSG00000024799
BC048609	ENSMUSG00000047733
1110014N23Rik	ENSMUSG00000024797
Zfpl1	ENSMUSG00000024792
Cdca5	ENSMUSG00000024791
Snx15	ENSMUSG00000024787

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr19:5922761-5922772	TCTTATCTCTT	+	6.02
NR2F1	MA0017.2	chr19:5922622-5922635	CAAAGGTCATCGG	+	6.1
PKNOX1	MA0782.1	chr19:5922342-5922354	TGACAGCTGTCT	+	6.37
PKNOX2	MA0783.1	chr19:5922342-5922354	TGACAGCTGTCT	-	6.22
TGIF1	MA0796.1	chr19:5922342-5922354	TGACAGCTGTCT	-	6.14
TGIF1	MA0796.1	chr19:5922342-5922354	TGACAGCTGTCT	+	6.37
TGIF2	MA0797.1	chr19:5922342-5922354	TGACAGCTGTCT	+	6.18
TGIF2	MA0797.1	chr19:5922342-5922354	TGACAGCTGTCT	-	6.27
ZNF263	MA0528.1	chr19:5921820-5921841	CCCTCCTCCTCCTCCACACCC	-	6.41

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06973	chr19:5921549-5923266	Heart
mSE_09196	chr19:5921550-5922986	Lung

Enhancer Sequence

CCCTCCTCCT CCTCCACACC CGAGCAGAAG AGGTATCCAC CATTTCCTCT GCCCAGGCTA 60
GGGATGGCCA GGAAGAGCAG GGAGGAGGCG GCAGGGTGCA GGGCAGGCCA GAGTCCTAAC 120
TGTCCCCATC CCAGCACAGG ACCTCGCTCA GGAAACCCCG CCCCAAGGCC AGACATCCCA 180
GGTCAGTCAT GCTGAGCCAT GGAAGCTGGA CAGCTCTAAC CCCAGAGCAC CTGCAGCCAA 240
CGGGAAAGGT GTGTTCTACC GAAGTCTAGG GAAGCTGTCT GATGAAGACA CACTCAAAGT 300
CTTAGAATCG TGTAACCACC ACACCAAATG CAAGGCCTGC TGACAATATC TAATCTGCTC 360
TCTCAGCTGC TGTGGAGCAC TGGGTGACTT CCTTTCCACT GGGGGAGAGT TGTGATGACG 420
GGAGATTTGC TGAGAGCCTG GGCCAGGTCC TTCCCTACCC TCACTCCATC ACACTAGATC 480
ACCAAGACAG CTTGGATGTT TCCACAGCAA ACTGGGCGTC CCTGACAGCT GTCTCATTCT 540
GAGCCAGATG TTCCCACCCA AATCCAGATG TGAGGAGCAC AGAGGCTAAC GGGAAGGGTG 600
GGGCCCATAT CAACCACCCA GGAGAAAACT GGGAACAACA ACCAGCAACT CTAAATAGAA 660
GATCCGGCCA CCACAGGACG AGGGGCTCCA GCCTGCCATG GAATTCCTTA CATGTTTATA 720
AGGCACGTTG TGGCGGGTGC CACTAGTGTC TCAGTTAGCT GATGGAGTGG AACTGGAACC 780
TCAGACATAT TAAGGAACTT TACAAAGGTC ATCGGACTAG CAAGAGAAGG CACTGGTACC 840
GAGGCTGGTC CACGTGTCTC CGAGGCAAGG GGCCATACCC ACGGTGATAG GGGTGGGGAG 900
CATGAGAGAA GCTATCACGT CTTCAGGCTT CCCCTATATA GTCTTATCTC TTGGCTCCCA 960
CTTCCCCAGC TTGCAAGTGT GCAGCTCTAT AAAGAGCTCT GACTAGGACC AGGCTGCCAG 1020