EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM096-04516

Organism

Mus musculus

Tissue/cell

Lung

Coordinate

chr13:23711570-23712780

Target genes

Number: 25
Name	Ensembl ID

Hist1h4h	ENSMUSG00000060981
Hist1h2af	ENSMUSG00000061991
Hist1h3g	ENSMUSG00000062417
Hist1h2bh	ENSMUSG00000064168
Hist1h3f	ENSMUSG00000059309
Hist1h4f	ENSMUSG00000069274
Hist1h1d	ENSMUSG00000052565
Hist1h3e	ENSMUSG00000069273
Hist1h2ae	ENSMUSG00000069272
Hist1h2bg	ENSMUSG00000058385
Hist1h2bf	ENSMUSG00000069268
Hist1h3d	ENSMUSG00000062808
Hist1h4d	ENSMUSG00000061482
Hist1h2be	ENSMUSG00000047246
Hist1h1e	ENSMUSG00000051627
Hist1h2ac	ENSMUSG00000069270
Hist1h2bc	ENSMUSG00000018102
Hist1h4c	ENSMUSG00000060678
Hfe	ENSMUSG00000006611
Hist1h1c	ENSMUSG00000036181
Hist1h2bb	ENSMUSG00000075031
Hist1h2ab	ENSMUSG00000061615
Hist1h4b	ENSMUSG00000069266
Hist1h4a	ENSMUSG00000060093
Hist1h1a	ENSMUSG00000049539

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr13:23712450-23712462	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712454-23712466	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712458-23712470	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712462-23712474	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712466-23712478	AAACAAACAAAC	-	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05883	chr13:23712177-23715261	E14.5_Limb
mSE_06466	chr13:23711231-23715201	E14.5_Liver

Enhancer Sequence

CAGCCTCTCT ATTTCCTTGA TTTATTTTCT CTGCCATCAT CTCTTCCCTA AGCACAAGAT 60
GCCAGTCTGC CTGGTGAAGA CACAGCTACA TCTGACAGAC CTGGATTTTC CTCCTTCTGG 120
CTTCAGCCTG CTTCCTGCTT TCCAGGTGTA ACAAGTGCAC CACCACTATG GGCAAGGGGC 180
ACCTAGGACA CATACTTGTT GAAAGCTGCC AAAGACGTGA ACTAAGTAAC TGTTTAAGAT 240
ACAGTAACAG AGAACCTAAT CATCCCTGAT TGCTTTTCCT TCTGCCAGAG CATAATCTCT 300
GCCAGTGGCA AATCCAGTCA CATTGAAATT GGCCTGCTTG CAAAGCAAGC ATCTACAAAC 360
AACCACATTT CTGTGGGAAC TCTTGTCTTA AACCCTTTTT CTATAAGACA CATACCTTAT 420
AAAAAGAAAA GGTTGTGGGT TGGAATGAAG AAGAAAGCAA AAGCTCCAAT TGAAACGAAA 480
TTGTTTGAGA GTGCTCATTT GTGCTCAAGG AGAGCAATCT CGGGATGCTA AGGTCGGTTC 540
AGTCTCTAGA AGAGGAACTT GGATACGTAA GCGCACAGAT AAAGAGCTGC ATGCTTAAAA 600
CATCTTTAGT TAATTTTAGT ACCTATAATT GATAGCAAAT TAACTATTCT GAACTTGTAT 660
GCCATGTGGA TGTATGTGCC AGTGAGTGTG TGGTTCCCTG AAACCATTAC GATCACCCTC 720
ATTTCCAGGG CACCACCGAG TTCACATAAA CACAAGTTTG AAGCATGAGA ACCCTGGCAG 780
GCATGGTAGT ACACGGGAAT AAATTTCACT TGGGAAGGAT TGAAAATTCC GGGCTAACTT 840
GGCCTATACT TCTTGATCAC ATGTCCAACA GATTGAGAAA AAACAAACAA ACAAACAAAC 900
AAACAAACAA AAACCAAAAA ACCGCATAGT TTTAAGTTTA AGGATACTTG AAACAACAAC 960
AACTCATTTG TTGAAAGAAT GCCTGGCTCT TTAAAGTCCT TGAAATCATT CGTGCAAATG 1020
CGCACTTGGT TTGTTTTCTT GGTAACAGGC TTGGTGCTCT GCCAGCTTCC TGGGCAATGC 1080
AGGAGAATGG CAGTCTGGAT CAACTGAGAT ATGACGGTTA CTCGCTTTTT GTAATGCGGC 1140
ACGATGCAGG CAATGTGCTT TAAAATGTAA TTGATGCCCA TGGCCTTGGA TAAGATGCTC 1200
ATGTTGGGGC 1210