EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-15965

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr9:108003220-108005520

Target genes

Number: 30
Name	Ensembl ID

Ifrd2	ENSMUSG00000010048
Gnai2	ENSMUSG00000032562
Rbm5	ENSMUSG00000032580
Rbm6	ENSMUSG00000032582
Mon1a	ENSMUSG00000032583
Mst1r	ENSMUSG00000032584
Traip	ENSMUSG00000032586
Uba7	ENSMUSG00000032596
Cdhr4	ENSMUSG00000079323
6230427J02Rik	ENSMUSG00000042106
SNORA61	ENSMUSG00000088955
RP24	ENSMUSG00000093456
4930535L15Rik	ENSMUSG00000093619
Ip6k1	ENSMUSG00000032594
AC137678.1	ENSMUSG00000093657
Gmppb	ENSMUSG00000070284
Gm20529	ENSMUSG00000092218
Amigo3	ENSMUSG00000032593
Mst1	ENSMUSG00000032591
Rnf123	ENSMUSG00000041528
Apeh	ENSMUSG00000032590
F630040L22Rik	ENSMUSG00000087645
Bsn	ENSMUSG00000032589
Dag1	ENSMUSG00000039952
Rhoa	ENSMUSG00000007815
Gpx1	ENSMUSG00000063856
1700102P08Rik	ENSMUSG00000032611
Qars	ENSMUSG00000032604
Impdh2	ENSMUSG00000062867
Dalrd3	ENSMUSG00000019039

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr9:108003255-108003267	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr9:108004127-108004139	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr9:108004131-108004143	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr9:108004135-108004147	AAACAAACAAAC	-	6.32
NKX2-5	MA0063.2	chr9:108003592-108003602	ACCACTTGAG	+	6.02
Nr5a2	MA0505.1	chr9:108004054-108004069	GAGTTCAAGGCCAGC	+	8.25

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03672

chr9:108003211-108004131

Cerebellum

Enhancer Sequence

ATCGGTCAGT CCTACAAATG AGACCCAGTC TCAAAAAACA AACAAACAAA ACCAAGAAGA 60
GTGAGGGAGA TGGGGTTTTG TTTCAAAAGA CAAACATCTC CTAGCTCATG TCTGAAACTG 120
ACATGAAGGA CACCAGGAGA GGGACATATG GAGCAGCTTT GACCACCTAG CCCAAATGTT 180
GGCCAAGTGC CAGAATCAGG CAGCTCTTAG CTACAGAGTC ACGGTCCCAG TGGCCTGCCC 240
ACATGATGGC AAGATGTGGC CCAAAGCACA GGTGTGCTGC CTTTTCTTCC TCGTAGTTCT 300
CTGGCCCCAA ACTCAGGGTG GGTGCTGTCC TGGACCCGAG CCGTGGGCTG TCCCTCCCCA 360
TCTCCCCTAA ATACCACTTG AGATTTTATG TATGTTCCAG GGCACACCAA GAAACTGTCC 420
AGCTGAGAGG GAGGATGACA GGGCATCCAC TGCCTGACAG CAAAGGCAGG GAGCATGCTG 480
TCAGGCAGCA CTCAGATGGT GTCAGCACTG GGGTGGCTGT CACTAGCAGA AAGCCCAAGG 540
TCTTCACTTT GGCCTATTGT ACCTGCCTAA AATAGCACTG GTCACTGCTA CTCTGCCACG 600
GCCGAGCTGT GTTCCTCTCT GCCTGTCTCT GAGGCCGACC AGTTCCCCTC AGCATCAGAA 660
GCGCGGCTGG CACCCTGCTT TCCCGTGCCT CCAGCTCTGA CTACTTTCTC TAGGGCAGCT 720
CCAGCTGCTG CAGAAACCCT GCTGCACATT TGCCATCAGA AAATCCTTTT GCCAGGCAGT 780
GGTGGTGCAC GCCTTTAATC CCAGCACTTG GGAGGCAGAG GCAGGCAGAT CCCTGAGTTC 840
AAGGCCAGCC TGGTCTACAG AGTGAGTTCT AGGACAGCCA GGGCTACACA GAGAAACCCT 900
GTCTCGAAAA CAAACAAACA AACAAACAAA ATTCCTTTCA AATTAGTTTT TAATTACTTT 960
ATTTACTTAC TTTTGTGGGG GGTTGTTTAT TTTGTTTTGT TGTTGTTGTT GTTGTTTTGC 1020
TTTGAGGCAC AGTTTCTCTG TGTAGCCCTG GCTGTCCTGG AACTCGCTCT GTAGACCAGG 1080
TTGGCCTTAA ATTCACAGAG AACCACCTGC CTCTGCCTTC AAGTGCTGGG GTCAAAGGCG 1140
TGCATTACCA GTCATGCAGA TGTTTTATTT TGGAACTTAT TTACTCTTTG TCTCCCTTAG 1200
TGGACTGTTG ACTCAAAAGG ACGGGAACTC GGTTTTGACT GCTATTGTGT CCCCAAGGAC 1260
TAAAACAGGA TTGGGCACAT ATCTGGGGCT AGATCAGCAT TTGTTGAATA AGTGGATGAG 1320
AGACTGAGCC TTTTCAGTGC CTCCGTGCCT CTGAAAAGAC TGGCAGCCCT TGGTACCCAC 1380
ACACAGCTTC CTCTCTACCA CGAGCAGATA AGTAAGGGCT CTGGTGCTCT AAGGCTCCCT 1440
TAAAGTGAAC TGCTTACTGA CTACTATCCT GGACCTGGGC CATGGGCTGT CCCTCCCCCA 1500
CCTCCCCTGA GTAGCACCTG AGATGTTATG GCTGCCCACA TATCTCCATA TGCTTAACTC 1560
GAGAGCAGGA AAAAGAGCTG GAGACGAGAG GCCTCAGGGA GATGGCGAGA TGGGTCATTC 1620
TTGGCTGTGC AAAGAGCAAC TTCAACAACT AGGCTACTCT CCCCAATTCT AAATGAGGGA 1680
TGTCCTCTTC TGTCCACAGA GGCAGGGCCA AGACCAGGAC TGGGGCAGGC TCTGAGAGGG 1740
AGCATCCCAT CTCCCCTGGC CACTACAATC TAGGAAGAGG GGGTACCTAT CCTGTACCTT 1800
CCTGTTCTCT CACTGGGCTG CCCTGGAGTT GGACTGACTA GCTGACCAGT GACTGCTTTT 1860
CCTGTGTCCC TTTTCTGTGT TCCTCTCTCC CTTCTTCACC CTTTCGCCTT GTGAGCCGCA 1920
AGTGCAACCT GTGAACCCAA AAATCTCTTC ACTTCATGCC CAAAGCTCTG TGTTCTGCTG 1980
GGTTTGGATA CACCAGCACC GGACATCGAT GTCTCCAATA CAAGCCATAG TCTGCCCTGT 2040
CTTTCAGGAC GACTTTGAAC TCAGTGTCCA GAATACAGAC CTGAAGTTGT AGGGGTACAA 2100
CAGGTGTCAA TGGCCCCTTT CCCAAGTCAG GATGGCTGAC TCATTTACCA TCATGCCAGC 2160
TAGCACACTG TTTCTGAGGG GGGCCGCTAG GCCCATCCCA GCTGAAAGAA GCATACCAGG 2220
TCCTTTTTAG TTCATACTTC CAGGAATGGG GTCCCTTCAC CCACTTCTTT GGTTTACCTT 2280
AATCTGGTCC TGACACTCAC 2300