EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-15386

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr9:44136240-44137070

Target genes

Number: 25
Name	Ensembl ID

Thy1	ENSMUSG00000032011
Usp2	ENSMUSG00000032010
C1qtnf5	ENSMUSG00000079592
Mcam	ENSMUSG00000032135
Gm10687	ENSMUSG00000074408
Cbl	ENSMUSG00000034342
Nlrx1	ENSMUSG00000032109
Abcg4	ENSMUSG00000032131
Hinfp	ENSMUSG00000032119
C2cd2l	ENSMUSG00000032120
Dpagt1	ENSMUSG00000032123
H2afx	ENSMUSG00000049932
Hmbs	ENSMUSG00000032126
Vps11	ENSMUSG00000032127
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
C030014I23Rik	ENSMUSG00000060380
Bcl9l	ENSMUSG00000063382
Ddx6	ENSMUSG00000032097
Arcn1	ENSMUSG00000032096
Ttc36	ENSMUSG00000039438

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA	MA0729.1	chr9:44136738-44136756	GAGGTCCTAAGTTCAATT	+	7.22
ZNF263	MA0528.1	chr9:44136383-44136404	CTCTCTTTTCCCTCCTTCTTC	-	6.55
ZNF263	MA0528.1	chr9:44136380-44136401	TTTCTCTCTTTTCCCTCCTTC	-	6.75

Enhancer Sequence

TGGACTTGGG TGAGTAACCT TGCCACTACT GCCCCTGTGG CACCTACTTT CTGGTACCCT 60
TGCCTCTGAG GTCCCAATAG AGGACCCCTC CTGGTGGTCC ATATCCCCAT CAACCATTTC 120
TTTTCTGTCC TTGTATCTAC TTTCTCTCTT TTCCCTCCTT CTTCCCTATC TCTTATTTCC 180
TTCCTGTTTC AAGGAAGTCA TGCTTGCACT AAGACTTATT ATCAAAGCTT TTCCTGTCTC 240
TGTTTTGTAT TTAAAACAAA AACAAAAACA AAAAAACAAA ACAGGGTCAT AGGGCTGATG 300
AGATGGCTTA GCGGGTAAGA GCACTGACTG CTCTTCCGAA GGTTTGGAGT TCAAATCCCA 360
GCAATCACAT GGTGGCTCAC AACCACCTGT AATGAGATCT GACACCATCT TCTGGTGTGT 420
CTGAAGACAG CTACAGTGTA CTTATCTTTG GGCCATAGCA AGCAGGGACT GAGGGAACAG 480
GGTTGACCTG AGAGAGCAGA GGTCCTAAGT TCAATTCCCA ACAACCAGAT GAAGGCTCAC 540
AACTATCTGT ACAGCTACAG TGTATACATA AAATAACAAA TACATATACA TAAAAATAAA 600
TAAATCTTTA AAAAACAAAA CAAACAGGGT CACACACTAA ATTGCCTTGA ACTTATTTAG 660
CCCTGGCAGG CCTTAAACAG GTAATCCTCC TGTCCCAGCC TTCCAAGTAG TTAGAATTAT 720
AGGCCTGAGC TACTAGACCT TGCCTATTTG GATCCTTTCT GGTGTTCCAT TCATCTTGTG 780
CTTTGTTCTG TTAACAAACA AATCCAAATC CTACTCCTCG CTGTGTCCCC 830