EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-15000

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr8:108484670-108486700

Target genes

Number: 30
Name	Ensembl ID

Atp6v0d1	ENSMUSG00000013160
Fam65a	ENSMUSG00000038604
Mir1966	ENSMUSG00000089432
Ctcf	ENSMUSG00000005698
Gm5915	ENSMUSG00000080021
Rltpr	ENSMUSG00000050357
Acd	ENSMUSG00000038000
Pard6a	ENSMUSG00000005699
E130303B06Rik	ENSMUSG00000013155
Gfod2	ENSMUSG00000013150
Ranbp10	ENSMUSG00000037415
Tsnaxip1	ENSMUSG00000031893
Thap11	ENSMUSG00000036442
Nutf2	ENSMUSG00000008450
Edc4	ENSMUSG00000036270
Nrn1l	ENSMUSG00000044287
Pskh1	ENSMUSG00000048310
Ctrl	ENSMUSG00000031896
Gm16156	ENSMUSG00000087436
Psmb10	ENSMUSG00000031897
Lcat	ENSMUSG00000035237
Slc12a4	ENSMUSG00000017765
Dpep3	ENSMUSG00000031898
Dus2l	ENSMUSG00000031901
Ddx28	ENSMUSG00000045538
Nfatc3	ENSMUSG00000031902
1810019D21Rik	ENSMUSG00000086390
Esrp2	ENSMUSG00000084128
Pla2g15	ENSMUSG00000031903
Slc7a6os	ENSMUSG00000033106

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESRRB	MA0141.3	chr8:108485880-108485891	TCAAGGTCAAT	+	6.02
ESRRB	MA0141.3	chr8:108486101-108486112	TCAAGGTCAAT	+	6.02
EWSR1-FLI1	MA0149.1	chr8:108485209-108485227	CCCACCTTCCTTCCTCCC	-	7.28
Foxd3	MA0041.1	chr8:108484837-108484849	AAACAAACAAAC	-	6.32
RORA	MA0071.1	chr8:108486100-108486110	ATCAAGGTCA	+	6.02

Enhancer Sequence

CTGTGGAAAG AGAGGGAAAG AATTCCAGCG TTGGTGGCGC ACGCCTTTAA TCCCAGCACC 60
TGGGAGGCAG AGACAGGCAG ATTTCTGAGT TTGAGGCCAG CCTGGTCTAC AGAGTGAGTT 120
CCAGGACAGC CAGGGCTACA CAGAAAAACC CTGTTTCGAA AAACAAAAAA CAAACAAACA 180
AAAGAATTCC AGTGAGTTAC TGCCTCCCGG GGACCCCAGC CTATACCCCA ACCCAGAAAG 240
CCAACCCACA AAACAGCGCT GCACTCAATC TTAGCCGAGA AGAGAGGCTG GGAAGCGGCA 300
AACACACACC ATCTCTCTAA AACGCTTTTG GAAGTCGCAG CGTTTACACA TTCGGCCTCC 360
GTTTTCCCAT CACTTGTCAG CCTTCTTGAA GGGCCGTAAA GGAAGCACCC AGGAATCAAA 420
TCCCGGGTTG TCATTCTATG TATAGAAGAC TTCAAATCTC CACACTTGTG CCACAAGCGT 480
GCACATGAAG GGCGGGGCCT GCGGAGGAGG CGGGGCCTGG CCATGACCAA CCCTGGGGCC 540
CCACCTTCCT TCCTCCCAAG GATCTGGAGC TCCTAGAGTA CAAGGCACCA TTTCGCCCTC 600
CAGGAAGATG AAACCACACA GAACGTCTTC CGCTGCCTCA GCCTACAAGG GGTCAGCTAA 660
CTACCCCGCC ATGCACTGTG TCAGGTGTCC AGGAGGGTAA CCCAGAGCAT GCTGGGAGAT 720
GGAGCCAATC TCGCATGGGT ACAAGGAACC AGAAAAAAGC CAGGGCACCA GATGGATCTT 780
GAGTTAAGCA TAGGAAATGC AGGGGCACGG GCTGCGGTTG AGATTACCCA TTAGCCTTTT 840
GGTCCCCAGA TCCTGCCAGT TTGCTCCAGA ACAGATTAAG GGGCCAGCCG CCACGCAAAT 900
CTCAGGCTGG TGAAAATGTG CTTCCGAAAC TAGAAAACCT CCCAGGCAGG AGGGAGCCCG 960
CGCATCTATT CTTGCCATGT GTCGAGATAA GACCCACAAA CCCATGCTCT ATCACTGGGC 1020
CACAAACACA TACGTTATCC ACCCCTTTTC CTCCTCTGGG ACAGGTTCTA AATGTAGCCC 1080
AGGCTGGCTT CAAACTTGTG CCAATGCTCC TGCCCCAGCA GGGTTGGGAT CACAGATGTA 1140
AGCACACGCC CACTTTCTTT TTTGTATATG TGGTGGATGT GTACATACAA GTCTACAAGG 1200
TCAATGGGGG TCAAGGTCAA TATCAGGTGC ATTCTTTTCC CACTCTCCGC CTTATTTTTT 1260
CCAGACAGGG TCTCTCACTG AACCTGGAGC TCATCAATTC AGTGAGACTG GCTGGCCAGC 1320
AAGACCCAGG GCCTCTCCTG GCTCTGTTTT CCCAATGCTG GGATCGTAGG AAGTCCGTGT 1380
GCCTGGCTTT GTACACCTGG CTCTCTGTTT CATATTGGCT GACTTTGCAG ATCAAGGTCA 1440
ATGAAGGTCA ATGCCAAAGC CAGCAGTCAT CTCAACCCAA GTCATGTTTA GGGCTGGTGG 1500
GGTCAGGTAG CTCCCCAGAC ATCCTGGCAT TTTTGCTAAC TTCCATGCTC ATTTGGGATG 1560
AGGAGTCACA AGACTCCTGG GCCACACCTG TGCCACCAAG CCACTGCTGC CATTCACATT 1620
GAAAACTCTT TACCGAGAAG AGCCACAACA CGAAGAAAAT AACAGAAATG AAAACGGCAT 1680
CCTGGCAGCT CACCTTACTT CCCTTTCTGC CTTGCCCGCT AGGAGTCTCC ATAGATTTAT 1740
CCCTCAGAAG CCGCCAGCAC TTATTCTCAG TTCTTGCCCT CTCCCTCTGT ATCCTTCCAT 1800
GAAGCTGGAC ATAAATACCA ATTATTCTAA ATGCACACAC TGCAGGCTGT CCCACCACCG 1860
CTACTGATTG TTTCTAAGAA GAATCTACTA TTATCCAGAA ACTGTACAGC AGTGCTTCTC 1920
AGCCGTCCTT ATGCTGCAAC CCTCTAATAC AGCTCCTCAT GTTGTGGTGA CCCCTCCATC 1980
ATAAAATTAT TTCATTGCTA CTTCACAGCT GTAATTTTAC TGTTATGAAT 2030