EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-13286

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr7:28319290-28320800

Target genes

Number: 19
Name	Ensembl ID

Rab4b	ENSMUSG00000053291
Snrpa	ENSMUSG00000061479
Itpkc	ENSMUSG00000003752
Numbl	ENSMUSG00000063160
Ltbp4	ENSMUSG00000040488
Shkbp1	ENSMUSG00000089832
Spnb4	ENSMUSG00000011751
Blvrb	ENSMUSG00000040466
Sertad3	ENSMUSG00000055200
Sertad1	ENSMUSG00000008384
Prx	ENSMUSG00000053198
Gm15541	ENSMUSG00000087371
Hipk4	ENSMUSG00000040424
Pld3	ENSMUSG00000003363
2310022A10Rik	ENSMUSG00000049643
Akt2	ENSMUSG00000004056
Map3k10	ENSMUSG00000040390
C030039L03Rik	ENSMUSG00000057093
Zfp60	ENSMUSG00000037640

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr7:28320599-28320617	TTGCCCCGCCCCTTTTTG	+	6.6
KLF5	MA0599.1	chr7:28320601-28320611	GCCCCGCCCC	+	6.02
Mecom	MA0029.1	chr7:28320562-28320576	TCCTATCTTATCTT	-	6.75
SP4	MA0685.1	chr7:28320598-28320615	CTTGCCCCGCCCCTTTT	+	6.17

Enhancer Sequence

TGAATACTAA TGCCCCCACG AGACAAAGGC ATCAGGATCA CCTGGGGATA GAGTTTTGTT 60
TGTTTGCTTG TTTCGAGACA GGGTTTCTCT GTGTAGCCCT GGCTGTCCTG GAACTCACTC 120
TGTAGACCAG GCTGGCCTCG AACTCAGAAA TCCACCTGCC TCTGCCTCCC GAGTGCTGGG 180
ATTAAAGGCG TGCGCCACCA CTGCCCAGCC TGGGGATAGA GTTAGAGATG GTTGTGAACC 240
ACTTGCCCCG GCCCTGGGAA GCTCTGAAAG AGCAGCAAGT CCTCTTACTT CTGAACCACC 300
TCTCCAGCCC CAAAAGATGC ACTTATCCTC CAGAGGTCCC CAGCCCTGAC TTCCAAGCCC 360
TCTGCTTCCA TTTTCCTCAG TTCCTGTTTC TGGCTACCAT TTGGGTACCC CAAAACTCAT 420
CTCCCATCGT TTGATTTGTT TTGAAAAGGT TTCACTTGGT AACCAAGGCT GGTCTCCATC 480
ATCCCGCCTC AGCCCTCCGT CAAAGGATGG GGTTACAGGT GTGCACAACC ACGCCTGATT 540
TCCTCTCATC TCATACACGT GCGTGTGTGT GTGTGTGTCT GTGTGCTTAT GTGCATGAGT 600
GTGTGTGAGT CTATGTGTGT GTGTGTGTGT GTCTGTGTGC TTATGTGCAT GAGTGTGTGT 660
GAGTCTGTGT GTGTGTGTGT GTATGTGTGC TTATGTGCAT GAGTGTGTGT GAGTCTATGT 720
GTGTGTGTAT GTGTGCTTAT GTGCATGAGT GTGTGTGAGT CTATGTGTGT GTGTGTGTAT 780
GTGTGCTTAT GTGCATGAGT GTGTGTGAGT CTATGTGTGT GTGTGTGTGT GTATGTGTGC 840
TTATGTGCAT GAGTGTGTGT GAGTCTATGT GTGTGGGGGC GTGTGTGCGT GCATGCGTGC 900
TTATGTGCAT GTGTGTGTCT GTGTGTGTGG GATGTGTGTA AGTGCACGTG CATGCATGTG 960
TGTTTGAGCC ACCTGGCATG AGTGTTAGTA ACTAACGTAG GATTTGGGCA ACAAACCAGG 1020
CAACAACCAT TCTTAACTAG TAAGCCGTCT ATCTCTTCAG CCCCAATCGA CCTTATTTTT 1080
CAAGACGGTC TATTGTTGAA TGTGGACCAT GGAATGACCC AAGTCAGAAA GGGTGGCTGG 1140
CCAGTGAGTG AGCTTTGGGA TCCATTTGTC TCTGTTTCCC TGTGTTGGCC ATGCCTACCA 1200
TTTTTCTGAG GTGCTGGAGG TCCAAATTCA GGTCCTCACA ATGGCATAGC AAGCACTTTA 1260
CCCACCCGGC CTTCCTATCT TATCTTCTGA CCCCACATTC AACCATCCCT TGCCCCGCCC 1320
CTTTTTGGTG ACATTAGCAA CTGAGCCTGG AGCCTCTAGT ATTTTAAGCA AGAGCTCTGT 1380
CACTGAGTAC AGCCCTTGTC TCCATACCTT CCCTTGTATC TGCTGTCCTG CCTGGGACCC 1440
CCTGCTTGCT GTCAGAGCCC CCTCAGCCCT CCCCTCACAG GGGTTCCCCA TCCAAGTCCT 1500
GCCCCTTCCC 1510