EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-13211

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr7:20321170-20323360

Target genes

Number: 23
Name	Ensembl ID

Vasp	ENSMUSG00000030403
Mark4	ENSMUSG00000030397
Exoc3l2	ENSMUSG00000011263
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Gm17375	ENSMUSG00000092002
Clasrp	ENSMUSG00000061028
Relb	ENSMUSG00000002983
Clptm1	ENSMUSG00000002981
Apoc4	ENSMUSG00000074336
Apoc2	ENSMUSG00000002992
Apoc1	ENSMUSG00000040564
Apoe	ENSMUSG00000002985
Tomm40	ENSMUSG00000002984
Pvrl2	ENSMUSG00000062300
Bcam	ENSMUSG00000002980
Cblc	ENSMUSG00000040525
Gm16174	ENSMUSG00000087593
Bcl3	ENSMUSG00000053175
Gm16184	ENSMUSG00000089886

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr7:20322879-20322897	GAAAGGGAGGAAGCGAGG	+	6.09
Foxd3	MA0041.1	chr7:20323252-20323264	AAACAAACATAC	-	6.37
Nr5a2	MA0505.1	chr7:20322808-20322823	GTATTCAAGGTCAGC	+	6.22
Nr5a2	MA0505.1	chr7:20322837-20322852	AAGTTCAAGGCCAGC	+	8.42

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11316

chr7:20321434-20323097

Placenta

Enhancer Sequence

CAGCCCCTCC CTGGGGGATT CTAGGCGGGG CTCTACCACT GAGCCACACC CCCAGCCCCT 60
CACTGGGGGA TTCTAGGCAG GGGCTCTACC ACTGAGCCAC ACCCCCAGCC CCTCCCTGGG 120
GGATTCTAGG CAAGGGCTCT ACCACTGAGC CACACCCCCA GCCCCTCCCT GGGGGATTCT 180
AGGCAAGGGC TCTACCACTG AGCCACACCC CCAGCCCCTC ACTGGGGGAT TCTAGGCAAA 240
CACTTGGAAG AATTTCATCC CTAGCCAGTC CTTTTTAAAA TTTGACTTTG AAGTCAGGCA 300
GTTAGTGGTG GTGCACGCCT TTGATCCCAA GATTTGGGAG GCAGAGGCAG GTTGGATCTC 360
TGAGTTTGAG GCCAGCCTGG TCTACAGAGT GAGTTCCAGG ACAGCCAGGG ATACACAGAG 420
AAACCCTGTC TCGAAAAACC AAAAAGACAT AAAAAATGAA GAGATGGAAA AATTTGATTT 480
TGACACAGAG TCCAAGTTGC CCAGGCTGGC CTTCAACTCA CTCTGAAGCT TGCCTCCTGA 540
GTTGCTGGCA TGACAGACCT GCTCCGAAGG AACTGGCAAG AGCTGTGCTC TGGGCTCTGG 600
GCACAGCCCT CTTGGCATCC CTCAGAAAGG AAGCTCCAGC TCTGAAGCCA GAAAGAGGGA 660
AAGACTCTGG GTGTTGCGGT GTCTGGAGGG CTGGATTGCT GTGTCCTGCA GGGCATTTTT 720
CAGCATTAGT GAGAAGTCTC TGCCCTTGGG CCACGCCTGT TGAAGCAAGC TGGGAGTCCT 780
TTATTGCTGT CTGTGTATGG GTGTTGTGCC TGCATGGGTC TGTGCACACG CACGCACGTA 840
TGTGTGTGTG TGTGTGTGTG TGTGTGTGCA TGCGTATGTG TGTGTGTGTG TGTGTGTGTG 900
CATGCGTGCG TGCGTAGATG CCTGTGTGTG TGCATGCGTG TGTGCGTAGA TGCCTCTCTC 960
TCTCTCTCTC TCTCTCTCTG TGTGTGTGTG TGTGTGTGTA GTGAAAACTG GAGTTGTAGA 1020
TGGCTGGCCG GGTCTCTTCC ACTGAGTTAT CTCTTGGCCC CATGGGTGGG TGTGTCCCTT 1080
GTGGTTCTTG GTTTCCTTCA ATCCAGGGAC AGCGGTTGTA AAACTGCTTA AAACTTCTAT 1140
TGTACTGCCT CATCCTGCGG TCAGCCACGG CGACCCTATG CCTACAGCTC ACCCCCTGCT 1200
TCCTTGAGCC TTTCCTGCCT CTCCAATCCT CCACCCAGCT ACATTATTAT TTTTTATTTA 1260
TTTATTTTTT TTAAAACAAG TTTGCCTGGC CTCTCTGTGA CACCCAGGAG GACACCTCAC 1320
CAAGTCACAG TCCTGCTTGC CTAGAACCCC CACGGCTCTT GTTCTCAGGA TGAAACCAGA 1380
GTAGAGTGTA ATGGCCCATG TCTACAGACC CAGCTCTGGG GCAGCTGCGT TGTTTTGAAT 1440
TTGAGGCCAG TGTCTTAGCT AGCTATATAT TGAGCCCCTG ACTCAAAGAA AAAAAAAATA 1500
CCTTGTTGTC TGTCATATCC TTGGCAGACA GAGTGAGCAA CTAGACTCGG TAGGCACTCA 1560
GTGTAAGCAT TTGTCAAAGC TAGGTGCACT GGCACACTCC TCGAATCCTA GCACTTGAGA 1620
TGGAGGCAGG AGGATGCAGT ATTCAAGGTC AGCCCTCTGT ACAGAGTAAG TTCAAGGCCA 1680
GCCTGGGCTC CAGGAGAGCC TATTTAAAAG AAAGGGAGGA AGCGAGGGAG CGAGGGAAGT 1740
TCAGAAAACT GGGGCTGAAG ATGAAGCTCA ATTGGCGCAG AGTGCTTGCG CTACTACACA 1800
CCCAAGTGCT GTTTCTGTCC CCAGGACCCA AGAAACTGGG TGTGATGGCT CATGCTCTTA 1860
ATCCCAGCAC TCTGAGGTAG AGGCAGAGGC TGGAAATGAC AAAGTGGCTC TGCAGGTAAA 1920
GGCAATTGCT GCCAAGCCTG ACACTTGACA ACCTGAGTTT GATCTTCAGG ACTCCGTGAT 1980
ATAAGGAGAG AACTGATTCC CAAGAGTTGT CTTCTGATCT CTAAACATTG CAGGGGATGG 2040
ACACGCGCAC ACAGACACGG GGACCCCCCT CCCATCTCAA TAAAACAAAC ATACAAACTT 2100
CTACAAAACA AAAGACATTT GCCAACACAT TAAAGATGGT CAACCTGAAA GCTAGGACAC 2160
GGAGAAATAG CCAGGGTTCC CTCCACTCAC 2190