EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-12488

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr6:72298670-72298990

Target genes

Number: 16
Name	Ensembl ID

Ptcd3	ENSMUSG00000063884
St3gal5	ENSMUSG00000056091
Atoh8	ENSMUSG00000037621
Usp39	ENSMUSG00000056305
0610030E20Rik	ENSMUSG00000058706
Tmem150a	ENSMUSG00000055912
Rnf181	ENSMUSG00000055850
Vamp5	ENSMUSG00000073002
Vamp8	ENSMUSG00000050732
Ggcx	ENSMUSG00000053460
Mat2a	ENSMUSG00000053907
Capg	ENSMUSG00000056737
Elmod3	ENSMUSG00000056698
Retsat	ENSMUSG00000056666
Gm20536	ENSMUSG00000092386
Tgoln1	ENSMUSG00000056429

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr6:72298914-72298930	GTGCTGTCTAGGAACA	+	6.51
Myod1	MA0499.1	chr6:72298685-72298698	GGAAACAGCTGCA	-	6.19
Myog	MA0500.1	chr6:72298688-72298699	AACAGCTGCAG	+	6.02
Tcf12	MA0521.1	chr6:72298688-72298699	AACAGCTGCAG	+	6.62

Enhancer Sequence

TCAGGTACGC CTTTTGGAAA CAGCTGCAGC GTGACCGTCC TGGGCCATGA CGGAAACTAC 60
CACCAGTTCC TGAACCGCTG TTAATCTCAG GGCCAGTGGG AAAATATGTC TTCCCAGCAG 120
ATAGTCTCAG CACATAGAGA TTCCTAGTTG GGGGAACAGG GAAAACTTGT GACCCTCAGT 180
TGAGAATCAC TGTTACAGGG GACTCCTGAG AAACAGAAGC CTTAAGCCAA ACAGTTCTGT 240
GAGCGTGCTG TCTAGGAACA GAGCAGCACT TGTTTGAGGG AGAACCAGGC TCTGAGCTTC 300
CTGACTCTTC CTCCACGTAG 320