EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-12472

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr6:71494020-71494520

Target genes

Number: 7
Name	Ensembl ID

Fabp1	ENSMUSG00000054422
Rmnd5a	ENSMUSG00000002222
Rnf103	ENSMUSG00000052656
Kdm3a	ENSMUSG00000053470
Reep1	ENSMUSG00000052852
Ptcd3	ENSMUSG00000063884
Polr1a	ENSMUSG00000049553

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr6:71494330-71494341	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr6:71494330-71494340	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr6:71494327-71494342	CAAGCCCCGCCCCCG	+	6.23
SP4	MA0685.1	chr6:71494327-71494344	CAAGCCCCGCCCCCGCG	+	6.17

Enhancer Sequence

AGAGCTGGTA AGGGCCAGCG ACCGGGGAAG CTCCGCAGCG GAGGTGGGAA CAGCCAGCTG 60
CGCTCTCAGG CTGGCCCCTA TTTCCGGGGC CTTCCACTCT GCCGAGGGGC CGAGGGAAGA 120
GTTTAGGATT GGGATGTGAG GAGAAGCGCG CCTTGGCCGC TCGGCGTCCG ACCCGGGTGT 180
GTAGGGCCTG GTTAGGAGCA CCTCGGCCTC GCCCCCAGGC GCTGGAGGCG CCACGCCGCC 240
GGGCCCCGAG GAAGCACTCT CTCCCCTGCG CGCGGTGGTA CGGGCCGCCC GGAACCTTTC 300
TCCTGCGCAA GCCCCGCCCC CGCGCCGGCC TGCAGACCAC CCGGAGGACT TGCCCTAGAC 360
CGGAAGGTTG TGTGCGGTGA ACCGGGTCGG AGCCCCCAAA AAGTCCAGGC ACCTGCCAGG 420
CAGGTCCTTT TCTCGCTCTC CTCTGTGTGC AGGGAAGCCC GACTTGTGTT TATTCTAGAA 480
GCTCAGTTCT CTCAGGCCCT 500