EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-10992

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr4:134258260-134258850

Target genes

Number: 14
Name	Ensembl ID

Stmn1	ENSMUSG00000028832
Paqr7	ENSMUSG00000037348
2610002D18Rik	ENSMUSG00000078521
Fam54b	ENSMUSG00000046671
Sepn1	ENSMUSG00000050989
Man1c1	ENSMUSG00000037306
Ldlrap1	ENSMUSG00000037295
Tmem57	ENSMUSG00000028826
Rhd	ENSMUSG00000028825
Tmem50a	ENSMUSG00000028822
D4Wsu53e	ENSMUSG00000037266
Syf2	ENSMUSG00000028821
Runx3	ENSMUSG00000070691
Clic4	ENSMUSG00000037242

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr4:134258827-134258847	GGGAGGTGTGTGTTGGGGGG	-	6.31
RREB1	MA0073.1	chr4:134258623-134258643	ACGGGGGTGGTGGGGGGGGG	-	6.46
RREB1	MA0073.1	chr4:134258620-134258640	GGGACGGGGGTGGTGGGGGG	-	6.63
ZNF263	MA0528.1	chr4:134258625-134258646	GGGGGTGGTGGGGGGGGGGGG	+	6.08
ZNF740	MA0753.2	chr4:134258632-134258645	GTGGGGGGGGGGG	-	6.92

Enhancer Sequence

CCAATAACCT CGGAGCTTCT GTAACATTCC CACTGCTTTA TTGATCACTC CTTCGTCTTT 60
CACATGCAAT TATGTACAAT TGTGGCAACG CTCGATAGAA GCAGTTAGCA GGAATGCTCG 120
AGATCTCTGG TCTGCAAGAG GCCGAGAGAT TACAAAACAG GACCCCAAAT ACCTCACATG 180
TCTTGGGTTT TCCAGAGCCT GCTGGAGCTT AGGAGAAGTC AAGACTTAAA AGGCACACAG 240
GGAGGGAGAG GGTTTCTAGT GGCTCCCTCC TGTACAAACG AAAACTAAGG ACCTAAAATC 300
CACTCCTACT AGCAACCCAT CAGGGAAAGC CTGGAGCCCA CCAGGGCTAG GAACTTAAAG 360
GGGACGGGGG TGGTGGGGGG GGGGGGAATC CACCTGGAGG TTGGTAGGAG CCATGAACTA 420
ACCTAGTTAT CCTAAAGTAG GCACCAAGCA AAGAGAGTAA CTTCGGATTG AGGGGCGGTG 480
CTGCGGCCTG CCTGAAGGGT CTTGGGCAGA CCAGGAGCCA GGAGAGGCCA AGAAGGTGGG 540
GAATCGCTTG CAGCTAGAAG TCTTGGCGGG AGGTGTGTGT TGGGGGGGGG 590