EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-10975

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr4:133736320-133738360

Target genes

Number: 11
Name	Ensembl ID

Hmgn2	ENSMUSG00000003038
Dhdds	ENSMUSG00000012117
Lin28a	ENSMUSG00000050966
Cd52	ENSMUSG00000000682
Sh3bgrl3	ENSMUSG00000028843
Ccdc21	ENSMUSG00000037443
Zfp593	ENSMUSG00000028840
Pdik1l	ENSMUSG00000050890
Pafah2	ENSMUSG00000037366
2610002D18Rik	ENSMUSG00000078521
Fam54b	ENSMUSG00000046671

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELK3	MA0759.1	chr4:133737007-133737017	TACTTCCGGT	-	6.02
ETV1	MA0761.1	chr4:133737007-133737017	TACTTCCGGT	-	6.02
ETV4	MA0764.1	chr4:133737007-133737017	TACTTCCGGT	-	6.02
NR2F1	MA0017.2	chr4:133737492-133737505	CAGAGGTCACGAG	+	6.36
Nr5a2	MA0505.1	chr4:133736494-133736509	GCTAGCCTTGAACTC	-	6.13

Enhancer Sequence

GAAAGAGTCA GTCAACCCCC CTGCCCCACC TCAAAAGAGG TTGTGACCCA CAGGTTGAGA 60
ACTACTGAAG ATCACTGAAG GCAGAGATAG AGGCTGATTA CAGGCATGCA GGACAATTTC 120
TGCACCCTCC CCACCAATGT TGTTTTGTTT TGAGACATGT CTTATGGAGC TCTAGCTAGC 180
CTTGAACTCC ATATGTGGTG GAAGTTGGCC TGCCTCTATC TCTGGGATTA GAGGCTTGGG 240
TTATCATGTC ACTTTGTATT TCAAAGTTTT TTTTTGTTTT TGTTTTTGTT TTTAAAGTAT 300
CCCTATTGGA TGTCCCTGCT TGGGACAGCA GGCAGGGAGC ATGTGGCTGT CCAGCAGCTA 360
TGTGTAACTG CTATGTATAA CCCCTTCACT GGATGCAATG CTCTGGAGAA CTTGCCCCAT 420
CTCTCACTAG TGGCACCACT CAGGAGAGTG GACCTGCTAC TCATCCGCTG TGAGGCAGCA 480
CAGGCACAGA GGTGACTTTC GCCCTTCCTG CCACCACACT TCTGTCAGTC ATATGTAAGA 540
GGATCATGAA CTCAGGAGGA CAGGCCCTGT ACCTTGCCTA AACAGCACAT CAGGCTGACC 600
CTGAAGGTGA GCAAGAGCTG GCCCTGCCCC ACATCTGCCA TGAGGTGACA ATAGATGCAG 660
GGGTGATGCC TTCCCCTCCT TGCCCCTTAC TTCCGGTGGC AGTAAGGAGC TGATCTCAGG 720
GTCATTAGAG TGAGTAAGCT GGCTCTGCCC CTTGCTGCCT GCCACACTCA GGAGAGCGGG 780
TCCTTTATCT TGCTTAAGCA GCACAGTAGT GCTGGCCCTG ATGGGGGAAG CAGATGAGCC 840
AGTCCCACCA CTAGTCTAGT GTGAGGTGGT GTGGTTGATG CCCTTACCAC CCACCTTACC 900
TCCTGCAGCA GTCAGGAGAA CTGGCTCTGG AGTGATGAGA GCTGGTGAGC TGGCCCTGCC 960
CCTTGACAGC TTCAGTACTC AGGAGAGCAA GCCCTGCACC TTATCTGGGC AGCACAGTAA 1020
ATAAAGATAG CCCTGGTGTA GGGGACACAG GTGAGCCAGC CCCAAAAGTG CAAGAGAGCT 1080
GGCCCAGGCA CCCCTCTGCT ATGAGGCAGG CTGGGTGGGA GGAGGGGATG CTCTCTGTCC 1140
CCTTGCCTCC TCAGTCCACA GAGGCAGCTG GGCAGAGGTC ACGAGAGCCA GAGAGCTAGT 1200
TCTGTACATC AACAGTAGCA GCACTCAGGA CAGTGGGCCC TGTGCCTCAC CTGGGCAGCA 1260
CAGTAGTACT GGGCCGACTG AGAAGCAGCA GATGAGCCAT CTTCAAAGAC GGACACACAC 1320
ACACACACAC ACACACACAC ACACACACAC GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA 1380
GAGAGAGAGA GAGAGATGGC TCCATGATTC ATCTGTGGTG AGGTGGTATG GGGGTGGGGG 1440
TGATGCCCTC TCCCCATTAC CCCTCACCAT CTGTAGCAGT TGGGGAAAAC TGGCCCAGGT 1500
CATGAGAGGG AGAGCTGTCC CTGCCTCCTA CTGATGGTGG CACTGGGTGG CCTAGCCAGA 1560
GCAGTGCTGT AGAACTCACC CTGGTGGTGC TGATAAGGGA GAGCAGGGGG CTGACCAGCT 1620
CAGCTTACCA GCCAGGCCCA GATCCAGGGC ACTGAGTTGG CCCATCCCCA AATCTGTATC 1680
ATCTGCAAAT GGTTGAAATA CATGAAAGGG CCAGTCCTGC TGATCCAAAG CTGCAGGATA 1740
ACTGGGGGGA GTCCCAGTGA AGATCCAGTA TTGATGGTGT CACAGAAGTC AGAGATCTCT 1800
CAAACCAGAC CAATGACTCA TTGCAATAAA CATTTGCTAG TGACGATATG TGGACAGAGG 1860
GATACACTGT GGGACACACT GTGACATACT ACAGCTTCCA TGATGTTTTC TATGCTTTGA 1920
CTTTGGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGAGTT GGTGGGGTTT 1980
CAAGGGTGAA GGGTGGACAC AAGGGGACAA AGAGATGAGT AGGACTGGGG TCCATGGTGT 2040