EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-10897

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr4:132017420-132018770

Target genes

Number: 28
Name	Ensembl ID

Srsf4	ENSMUSG00000028911
Ythdf2	ENSMUSG00000040025
Gmeb1	ENSMUSG00000028901
U11	ENSMUSG00000077323
Taf12	ENSMUSG00000028899
Rab42	ENSMUSG00000089687
Snhg12	ENSMUSG00000086290
Snora16a	ENSMUSG00000065097
Snora44	ENSMUSG00000064604
Snora61	ENSMUSG00000064949
Trnau1ap	ENSMUSG00000028898
Gm17300	ENSMUSG00000091021
Snora73b	ENSMUSG00000065353
Snora73a	ENSMUSG00000064387
Rcc1	ENSMUSG00000028896
Snhg3	ENSMUSG00000085241
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042
Gm12981	ENSMUSG00000086997
Sesn2	ENSMUSG00000028893
Gm12999	ENSMUSG00000087352
Atpif1	ENSMUSG00000054428
Dnajc8	ENSMUSG00000054405
Ptafr	ENSMUSG00000056529
Eya3	ENSMUSG00000028886
Xkr8	ENSMUSG00000037752
Rpa2	ENSMUSG00000028884
Ppp1r8	ENSMUSG00000028882

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr4:132018340-132018361	AAAAAAAAAATGAAAGTCATG	-	6.84
ZNF263	MA0528.1	chr4:132018511-132018532	AGAGCAAGGGAGGGAGGGAGA	+	6.08
ZNF263	MA0528.1	chr4:132018516-132018537	AAGGGAGGGAGGGAGAGAGAG	+	6.12
ZNF263	MA0528.1	chr4:132018524-132018545	GAGGGAGAGAGAGAGGGAGAG	+	6.34
ZNF263	MA0528.1	chr4:132018520-132018541	GAGGGAGGGAGAGAGAGAGGG	+	7.39

Enhancer Sequence

GCCCAACTGT ACTAGGAGAG GTGAGGGCAC TGTGATGTGC TCATATACAC ATTTAAAATG 60
GAGGCCGTGG AGCAACAAAA AGCTAAGACA CGTACCGAAA TGAATGAACT ATGAAATAAC 120
AATGCTAACT CAACAACAGA CACAGCCCAG TCAGCATGCA CAGCGCATGC ACACAGTTAG 180
GCTCAGGCCC GAAGATCAGA GGTTAACACT GCTCCTGGAC ACCCAGCCAG TTAGAGGTCA 240
GCCTGGGGGT TTGAGAGGAG GCTCAGCAGC TAAGAGTGCT GGACCTGGGT TCGGTGTCCA 300
CCAGCACCCA CACGGTGGCT CATAATCGTC CACGACTCCT TTTCAGGGAA CTGGACATAC 360
TTGTCTGACC TCTGACTCCC ACACATGCAG GCAAGACACT CATACAGATA AAATAAGATT 420
TAAAAATCTA AAAGAATCAT TTTAATCATA CTTGAAAAAA ATTAATCAGC CTGGGCTCCT 480
TAGTACTGCT TCCAAACAAC AAAAACAATA TAAATTCTGT CATAGGACAT GACTTTATCA 540
AGGATATAAT GCTAGGAGAA ATAAGCCAGT TGGGGACCTC ACTCATGTGG GGCATCTAAG 600
CAGCTAAGGT AGGAAACACA GTGGAGAGGT GAGAGGGAGA CTCGGTATGA GGTTTTTTTG 660
GTTTGTTTTG TTTTGTTCTT GTTTTTTGTT TTTAAATTTT ATGTGTAAGA AGGAGTGTTT 720
TGCCTGCAAG CTCATCTGTG AACTACCTGT ATGCCTGAAT CCATGGAGAC CAGACTAGGG 780
CATCAAATTC TCTGCAACTG GAGTTACACA CAGTTGTGAG CTGCCATGTA GGTGCTGGGA 840
ATTGAACCAA GAAGCAGCCA GTGCTTTTAA CGGCTGGGCC TTCTCCTCGG GCCTGAGTTT 900
TAATTTTTCA AGATGAAAAA AAAAAAAAAA TGAAAGTCAT GCAGTGGTGG CTTGTGCCTT 960
TAATCCCAAG CACTTGGGAG ACAGAGCAGA TGGACCTCTG AATTCTGAGT TCGAGGCCAG 1020
CCTGGTCTAT AGACAGCGAG AACTATACGG AGACAAACAA AAATAGAGGA AAGAAAGAAA 1080
GAAAGAAAGA AAGAGCAAGG GAGGGAGGGA GAGAGAGAGG GAGAGAGGGA GAGAGAGAGA 1140
GAGAACAGAC AATAGGACAA TAGTGGTAAA TATCTATAAT CCCAGGCCCC TGCAGCCAGA 1200
AGGGTCTACA GAGTGAGTTT CTGGCCATTG AGCCATCTTC CCACCCACCC TCTTTTAAAC 1260
ACAGTTACAG GAACCCTACA GTTGCCTATA AGTCATCTCA ACTTGCTCTA GCCAGAAAAA 1320
ACTGAAAACT TGGTAACACA AGCTCCTTGG 1350