EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-09800

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr3:88985190-88985840

Target genes

Number: 26
Name	Ensembl ID

SNORA42	ENSMUSG00000084433
Rit1	ENSMUSG00000028057
Gon4l	ENSMUSG00000054199
Msto1	ENSMUSG00000068922
Dap3	ENSMUSG00000068921
Ash1l	ENSMUSG00000028053
U6	ENSMUSG00000065786
SNORA17	ENSMUSG00000077804
Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Gm16069	ENSMUSG00000086718
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Krtcap2	ENSMUSG00000042747
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Cks1b	ENSMUSG00000028044
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3

MA0135.1

chr3:88985370-88985383

AAATTAATTTTCC

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01437

chr3:88963927-89055714

Th_Cells

Enhancer Sequence

GGCTTCAGGT GTGTGAGCTA CCATTCGTCC TCAGCCCTTC CTCACACATT GGGCAACTCA 60
GTTTAATGGG GTTGTCCAAC TAAGGGTCAT GTGGGTCTTT TCCTTGGGAA AGACTAATGT 120
AACTGAAGTC AGGGCACTCT ATGGCTAGAG CCAAGACAGC AGTAGACAGG CAGAGGCTGA 180
AAATTAATTT TCCTGGAGAG GCCATGTCAC AATGGACGAA AGATCAAGGG AGTGCCCAGA 240
AGTGAGAAGG ATCTCTTTCT CTCTCTCTCT TTTTTTTTCT TGGTTTTTTT GAGACAGGGT 300
TTCTCTGTGT AGCCCTGGCT GTCCTGTCCT GGAACTTACT TTGTAGACCT GGCTGACCTC 360
GAACTCAGAA ATCTGCCTGC CTCTGCCTCC CGAGTGCTAG GATTAAAGCC GTGGGCCACC 420
ATGCCTGGCT CGAATCTGTT TTTCATGAGG ATGCCAGGAG AGCTAGGAGC GGATGCTTCA 480
GAAATGACTG AAAAGTATGA AGAGAATAGA TGTAGTGGGA TTGGTTCATG GGATGCCGCC 540
ATATTGGCCG AGGCCCTGAC CGTTGATGGG CCTGGAGCAT GTTCTTAGAC CTAGGGGACT 600
CCGGGTGAGC AGAGCCCCGG CAGAGTGGTC GGTCCTCACC CGTGCATCTT 650