EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-09791

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr3:88950510-88950690

Target genes

Number: 33
Name	Ensembl ID

2810403A07Rik	ENSMUSG00000028060
Rit1	ENSMUSG00000028057
Syt11	ENSMUSG00000068923
Gon4l	ENSMUSG00000054199
Msto1	ENSMUSG00000068922
Dap3	ENSMUSG00000068921
Ash1l	ENSMUSG00000028053
U6	ENSMUSG00000065786
SNORA17	ENSMUSG00000077804
Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Gm16069	ENSMUSG00000086718
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Krtcap2	ENSMUSG00000042747
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Adam15	ENSMUSG00000028041
Zbtb7b	ENSMUSG00000028042
Lenep	ENSMUSG00000078173
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr3:88950544-88950564	CCCCTACCCCCCCCCCCCCC	+	6.07
RREB1	MA0073.1	chr3:88950543-88950563	CCCCCTACCCCCCCCCCCCC	+	6.15
ZNF740	MA0753.2	chr3:88950550-88950563	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr3:88950551-88950564	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr3:88950552-88950565	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr3:88950547-88950560	CTACCCCCCCCCC	+	6.13

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_06321

chr3:88950578-88952994

E14.5_Liver

Enhancer Sequence

AGGATGAAAA AACTAAGCTC AGGCCTCCTG CTCCCCCCTA CCCCCCCCCC CCCCCGGCCA 60
CCACCTCATC ACAGAATTTG AGTATTGCTG CAGATGGCAT TGTGCAAGGA CCACAAAGAT 120
GTTCCCCAGG CCCCTACCAG AAGGTGGGGA GGACAAAGGA ATGAGTGAAT AAGTGAACAA 180