EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-08315

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr2:25229030-25230470

Target genes

Number: 23
Name	Ensembl ID

Nrarp	ENSMUSG00000078202
A830007P12Rik	ENSMUSG00000059555
Tubb4b	ENSMUSG00000036752
Rnf208	ENSMUSG00000044628
Tmem203	ENSMUSG00000078201
Ndor1	ENSMUSG00000006471
Ssna1	ENSMUSG00000026966
Grin1	ENSMUSG00000026959
AA543186	ENSMUSG00000091706
Dpp7	ENSMUSG00000026958
Uap1l1	ENSMUSG00000026956
2010317E24Rik	ENSMUSG00000026955
Entpd2	ENSMUSG00000015085
Npdc1	ENSMUSG00000015094
Fut7	ENSMUSG00000036587
Abca2	ENSMUSG00000026944
Clic3	ENSMUSG00000015093
BC029214	ENSMUSG00000047617
Ptgds	ENSMUSG00000015090
Lcn12	ENSMUSG00000026943
Gm13433	ENSMUSG00000083043
Edf1	ENSMUSG00000015092
Phpt1	ENSMUSG00000036504

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA5	MA0766.2	chr2:25229712-25229722	CAGATAAGGA	+	6.02
RREB1	MA0073.1	chr2:25230218-25230238	CCCCACCCCCACCCCCAACC	+	6.06

Enhancer Sequence

GAAGAAGGTT GGGTGTATGT ATGATGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 60
GTGTGTGTGT CCCACAGCAC CTGCTGTGCT GTGCTGCTGC AGATACACTG CCAGACACAG 120
ACCAAAGTCT CTGGGGAATC CAGCAGGCTT CTCTCCCTCC TTCCGGTCTA GTTGGCTGGG 180
ACAGGAGACT GTTGAATAGC CCCCTGTCTG CCTTGAGAAC AGGACCTGCA TTATGCCTGA 240
GCCTGGAGGC AGGTTCTCAG GAATCTAAGC CCCTCTTCCA ACCCTGTTCC CCATTTATCC 300
TGTGCACTGC CCTGTCAGGG CTGCCCACTC ATGGCAGCTG CCAGTTCATT TTAGTACACA 360
GAGGGACAGA GACAGAGAGA GACTGGGCTC TACTTGCGGT TCAAGCCTTG ACTCCCTGTT 420
CTTGTGGAAG GGGAAGCTTC TAGGCATAGC TGGTTATCTT GGTGGCTGTG AGTGTGAAGT 480
CAGCCCTGGC ATGGGACTGT ATATAATGGA CAGGGTCCGG GTTTGTCTGT GGTACAGATC 540
TGTTTTACCT TGTGTGGCCC TGAGTCAGTT ACCCCTCTGA AAGCCATGTG CTCAGGGCCC 600
ATGACTGGGC AATATTTAGC CATTGCTCTG TAAACCTAAA GCCAGGCTCT AGCTCTAACT 660
TTTTTATAGG TCAGCCAAGG TCCAGATAAG GATGTTGGTA TACTTGCTGA ACCACTTTAG 720
CTCCCTATGA GCACATATGA CCTCAAATGC CCAGTTCTAC GGTATATGCC TCTTTTCTGT 780
GCAAACGTTC CAGGTCCTTC CTAGAACTCA GTGCCAGTAC CTGCTCTGGC CCCACCCTCT 840
GGAGGCAGCC TCCTTTGTAG CTCTCATTGC CTCACCCTGA ACCTGCAGAC CACTCAGCAC 900
AGCAGGATGG GACAGGAACT TTGGGGCCTG CTTGGAGCTA GAGTCTCTGT CTTGCACATC 960
TGAGCCAAAT ATTGTATCTC TGTCACTCAC TCGGATGGCT TAGCCTCGGG GGTGACCCTG 1020
ATGCCACAGA TAGGGTTGGA GAGCCCAAGG GAAGTTCAAA AGCTGTGGGT CACCACACCA 1080
GGGCCTATCC ATTTCGTCTC TTGCCCTTCC CTCTTTGATA CTCTTGATAT ATGTATCTGA 1140
TATGTTTTGT CAGGCACTGG GTGACTCCCT GCCCCTGCTT CCTGCCTCCC CCACCCCCAC 1200
CCCCAACCTC TCAGGGCAGG CAAGAGGATT CCAAGTCCTA ACTAGGCACA AAGTCAACAG 1260
AGAAAGCAAA AGCACACTCA GGAATCAGTA CTGACTGAGG TTCCCTGCAC AGGCCTGGTC 1320
CCTGGGGTTT GTACTGTCGC AGTTAGCTGG AGGATTCTGG AAGGGCTGGG GAGCCAGGAT 1380
GAGATTATGA GGCCATTAGG CTTGCCCAGA GTTAAGCTAT GTCCCCGACT GTCTGTTACA 1440