EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-07520

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr19:4627240-4628530

Target genes

Number: 12
Name	Ensembl ID

BC021614	ENSMUSG00000058216
Ppp1ca	ENSMUSG00000040385
A930001C03Rik	ENSMUSG00000087132
Rhod	ENSMUSG00000041845
Syt12	ENSMUSG00000049303
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Gm960	ENSMUSG00000071691
Spnb3	ENSMUSG00000067889
Dpp3	ENSMUSG00000063904
Mrpl11	ENSMUSG00000024902

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:4628173-4628188	GGTGGGCGGGGCTTT	-	6.6
SP2	MA0516.2	chr19:4628172-4628189	AGGTGGGCGGGGCTTTG	-	7.47
SP4	MA0685.1	chr19:4628171-4628188	AAGGTGGGCGGGGCTTT	-	6.83

Enhancer Sequence

TCAGGTGCTT TAACAATTAG AAAGACCAAG TGAATTCTGC AGAAGTCTGA ATGAACCTTA 60
GTGAGACGTG TGGTTTGGTT TATATGGATG TTTTCACCCT CATCCTCCTA ACTCAACAGT 120
CTCTACTTGG CCTCCAGCTT TCAAAGCATC CCCCTTCTGT GGACCCTTGT ACAACTCACA 180
CTGTAGCCAT TCCCAGCATA TCCCTGAACC TCAGGCTCTG AAGATGGCAC TATTCATCAT 240
TTTTATGTGT TTATGCCCAT CTTTCTACTC CAGGTTTACC ATGTGTATTT GTAACTATGT 300
GAATTATGTG TCTACAGGAG AGGTGGTCAG GTCCCCTGTA ATTGGAGTTA CACTTTGACA 360
AGCTGCCTGA TGTGAATACT GGGAACCAAA CCAAACCAAT AGCAGCATGG TCCCTCTTCC 420
ACACAGCCAT TTCTCCAGTC CCTTTTTATT TAGTCTTGGC TGTCTGGAAC TCAGTATATG 480
GTGGAGAACA AGCTGGGCTT GAACTTGCAG AGATCCTCCT ACCTTTGCCT CACAAGTGCT 540
AGAATTAAAG GCATACACCA CAATCCCTGG CCCTGTCTTT TTTTAAATTA AATTCTTTGA 600
GACAGGGTCT CTTATATCCC AGAGCTGACC TTTAATGTCT GACCATCTGT CCCTCTATAT 660
ACATGTACAC TTAGTTAAAA ATACATCTTT TAAAAAGTTG AAAAAAATGA GTGTTTGCAT 720
GAAAGCTGCA GGAGCACACT TCATAAAATG GCATAGTAGC ACATATGTAA TCCCAGCACT 780
CAGGAGAGGG AGGCAGAAAG AGCAGGAGTT CAAGATAACC CTCAGCTACA TAGGAAGATA 840
AAAGCCATTC TCAGATACAC AGTGAGACCC TCCTCCCCGC CCCCACTCCT GTAATGTCTA 900
CACCAAGGGG AGGGGAGAAG TAAGCCAATA GAAGGTGGGC GGGGCTTTGG GAGAGGAGCT 960
GGGTTATGTG CGTTCAGCAG TCACAGTCTT GTTTTCAGTG TGATGGAGAC CTCTGGGGAT 1020
TGGGGGAGGA GCACACGGCA CAGTGACTAT CCTTAAAGCA TCAAGTTGAC ACTTTCAAAG 1080
GGAAGTCTTA GGTAAGAATT ACACCACAGT ACTATGCATT CTATGATACA CTGCTTCTTG 1140
TTTCCCCCTT TAAGACAGTT TTGCTAGATA GTTCTGTCTG TCCTGGAACT TACTATGTAG 1200
GCCAGGTTGT CACTCTGTCT CCTAAATGCT GGGATTAAAT GTGAGAGCTA CCTGGCATTC 1260
TCATTACAGA TTTTTATGTT ATAGGAGCTC 1290