EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-07424

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr19:3831690-3832390

Target genes

Number: 22
Name	Ensembl ID

Ppp6r3	ENSMUSG00000024908
Lrp5	ENSMUSG00000024913
1810055G02Rik	ENSMUSG00000035372
Suv420h1	ENSMUSG00000045098
Chka	ENSMUSG00000024843
Tcirg1	ENSMUSG00000001750
Ndufs8	ENSMUSG00000059734
Aldh3b1	ENSMUSG00000024885
Unc93b1	ENSMUSG00000036908
Acy3	ENSMUSG00000024866
Nudt8	ENSMUSG00000024869
Gm16312	ENSMUSG00000086107
Doc2g	ENSMUSG00000024871
Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
Gstp2	ENSMUSG00000038155
BC021614	ENSMUSG00000058216
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Coro1b	ENSMUSG00000024835
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:3831693-3831708	TGAACTCTGGACCTT	-	6.32
Rarb	MA0857.1	chr19:3831693-3831709	TGAACTCTGGACCTTT	-	6.42
SOX10	MA0442.2	chr19:3832305-3832316	AAAACAAAGAA	+	6.62

Enhancer Sequence

ATTTGAACTC TGGACCTTTG GAAGAGCAGT CGGGTGCTCT TACCCACTGA GCCATCTCAC 60
CAGCCCATAA AAACAACTTT TAAGAAACAC TCATTGTTTT CTACTTGTCT TGCACGGGCT 120
CAATGGGGCC ACGGGCAGCT TGTCCAAAGG TCAGCGAACA GATAAAGCAG GGTGAGTGAC 180
CCAGCCGTCA ATCAAATACA ACTGAGAAAG AAGCCTGAAA AGTGGGGGAG CCACACTGGG 240
TGCCCTTGGC ATCTCCTGGG AGGGTACGGC TGCTGCGGCC CTTAGAGGTG GGACTCTTCT 300
TTATCTGCTA ACCCCTGGAA CACCAGCTGC CCAGGGCAGG GATGCAGGGG ATGTGTGCAA 360
AGTCCTGGAG ATAAGGATAG ACAGGCTATC TAGGAGAGAA AGTCAGCAGG CAGAGCCCAG 420
CTCGGGGCCC TCAGGAGACT GTGAAGGGAA AGGCGAGGAC CAGAGTTCAA GTCCCAGCAC 480
CAACATGGGC ATCATCAACC ACCTATTACT TCAGCTCCAG CAGATCCAAT GCTCTCCCTT 540
GGCCTTTCAG TCACTGCACG CATGTAGTGT GCATACATAC TTACATGCAG GCAAAACATC 600
CATTCACATA AAATAAAAAC AAAGAAAACT TTAATGAATA AGTAAACAAT ATTTAAAAAT 660
ACACTTGGGG GGGCTGTTGA GATGGCTCAG TGGGTAAGAG 700