EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-07181

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr18:34569560-34572330

Target genes

Number: 9
Name	Ensembl ID

Apc	ENSMUSG00000005871
Srp19	ENSMUSG00000014504
Reep5	ENSMUSG00000005873
Pkd2l2	ENSMUSG00000014503
Fam13b	ENSMUSG00000036501
Kif20a	ENSMUSG00000003779
n	ENSMUSG00000064857
Cdc23	ENSMUSG00000024370
Hspa9	ENSMUSG00000024359

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr18:34570899-34570914	AAGGTTCAAAGTTCA	+	7.37
Hnf4a	MA0114.3	chr18:34570900-34570916	AGGTTCAAAGTTCAAA	+	6.77
IRF1	MA0050.2	chr18:34571173-34571194	TTTTGGTTTTGGTTTTTTTTT	+	6
JUN(var.2)	MA0489.1	chr18:34570631-34570645	AAAGAATGACTCAG	+	6.17
Nr2f6	MA0677.1	chr18:34572131-34572145	TGTCCTTTGACCTC	-	6.14
RXRB	MA0855.1	chr18:34572131-34572145	TGTCCTTTGACCTC	-	6.2
RXRB	MA0855.1	chr18:34570900-34570914	AGGTTCAAAGTTCA	+	6.63
RXRG	MA0856.1	chr18:34570900-34570914	AGGTTCAAAGTTCA	+	6.67
Rxra	MA0512.2	chr18:34572131-34572145	TGTCCTTTGACCTC	-	6.19
Rxra	MA0512.2	chr18:34570900-34570914	AGGTTCAAAGTTCA	+	6.55

Enhancer Sequence

CATATGTAAG TACACAGGAG TAGGTAAAAA AAAAATGCTG GGTGAACTAG TAGTTAAAAC 60
CTCAAACTGA CAAATTTTAG AGATCGTCAT GACAAATTTC GGAGATCATT ATCTTATGAT 120
TGACTCAATT TCCAGTTTTT AAGGGGCAAA ACCACAGATG TAATGGACAG CTTCCAACGT 180
CAGCACTGGC TGGATATGAT CATCATTAGT TTAGTTGGGA GACTCTATTT AAAACATAAC 240
CCCCTGGGTT GACAGTTGGG TTAAATTTGT TTCCGAGCCA TCGAGATATA TTGGTTTGGT 300
TCCAGAAATA AAAAGTACAG ATGGGAGCCA ACATGAAGTT TGAGATATGG CCCCAAGCGT 360
CACGTGTTTC AGTAAACTGC TGCACAGTCA GTAATAAAGT ACATTTGTGC TAAGAAAAGA 420
AACGCAAATG TTTGAAGGCA GGGAGACCTG CTCAGTCTAT GCTCCCCACC CCTCTCTGTG 480
AGGTCCACGG CATCGACCTA GCATGTAAAA AGTGTGTTAA CGTTTTCTGT CTTAACTGCC 540
CGACGCGTGT AGCTAGAAGC TGACACACAG GATTTCTCTC CTCCCCGAAG TGCAGCTGTA 600
TAGCAATTAT GGTCGATTGG TATTGCAGGG GTAGGTGTCT GAGATAAAAG ACAGCTGTAG 660
CCAGCTTGAT AAGGTATCCT TGGCTGGTTA TAAAAAGCTT AGTTCTAGAG ATAACACTAA 720
CACGTGCTCG TTACCAACCA TTTTAGGTAG GAGAAAATGT GAGCCAAAAG ATTATAATTC 780
CACTGGAGAT TTCTGAATAC TTAAAACAAC TTATGTCTAC AGTAAGGGGA CTCATTAACC 840
ATTGTAAAAT ATGCAGGGAA GGTGCTGGAG AGATGGCTCA GCGCTTAAGA ACACAAGCTG 900
CTCTCCCACA GGACCCAGGT TCAATTCCCT TCCCCCAAAG GGCAGCTCAC ACCTGTTTTT 960
GTAACTCCAG TTCCGGGGCT TCTGACACGC TCACAGGCAG ACAGGCAGGC CACCAGTGCA 1020
CATGAAATAA TTTTTTTAAA AAAAAAATGC AGTGACATAA ACACAACTGT TAAAGAATGA 1080
CTCAGACATT TGCGTGTGCA TGCGCCACGC AGATGGTGGC AATCAGAGGA CAACTTGGTT 1140
CCCACCATCA ACATGTCGCT GGTTGTCAGG CTTGACAATT TGAGTCTTTT CCCTCTGATC 1200
GACCTTGCTG GCCCCACAAT AGGTTTTGGT TTTTAATGGG GAGTTCTGGG AAAAAAACAA 1260
AACACAATAG TTTATAAAAA GGAGAGAAAG GGAGCTGGTG AGATGGCTTA GTGGGTAAGA 1320
GCACCCGACT GCTCTTCCAA AGGTTCAAAG TTCAAATCCC AGCAACCACG TGGTGGCTCA 1380
CAATCACCCA TAATGAGATC TGACTCCCTC TTCTGAAGTG TCTAAAGACA GCTACATTGT 1440
ACTGTAAATG TAATAAATAA GTAAATGTTT AAAAAAAAGG AGAGAAAGAA ATACTACTGA 1500
TTAATTTTTA AAAACAATTC TACTGTGTTC CAAAGCATGG GTTTAAATGT GATACATGTT 1560
TGGCTGAAAA AAAATCACTC AGTCTGTAAA GTGGGTTCTT GGGGTTTTTT TTGTTTTGGT 1620
TTTGGTTTTT TTTTTTGTTT GTTTTTTGTG TTTTGGTTTT CGAGACAGGG TTTCTATGTC 1680
TAGCCCTGGC TGTCCTGGAA CTCACTTTGT AAACCAGGCT GGCCTCGAAC TCAGAAATCC 1740
ACCTGCCTCT GCCTCCCAAG TGCTGGGATT AAAGGTGTGC ACCACCACCG CCTATATATT 1800
ATGTGTGTAT TTGTATGACA GAGGAAGCCA CACACATGAC ACATGCATGG TTGGAGAACA 1860
AGCTTGTGTG CTTCTCTCCC CTTTTTCCTT GTTGCTGCTG CATGCCAAGT TAATTGCTGA 1920
GCCATCTCAC CAGTCCTGAT TTGACTTTAG CTTTTTAAAA AGAGAATATT ATCTATGTAC 1980
ACATCCATAC ATACAACCTG GAGAATTCAT GTCTAGCTTT AGTACAAGGA CTGGAGGAAA 2040
CTTCTACATA ATTTGTATGT TTCTGGCTTT AATGATTAGA TGCAACAGGG CTGCCGAGAG 2100
GGCTCAGCAG ATAAAGGTGC TTGCGGCCAA GTCTGATGGT CTCGGTTTGA TCCCTAGAAT 2160
CCACATGTAC TGGCTAGTTT TGTGTCAACT TGACACAGCT GGAGTTATCA CAGAGAAAGG 2220
AGCTTCAGTT GAGGAAATGC CTCCATGAGA TCCAACTGTA AGGCATTTTC TCAATTAGTG 2280
ATCAAGGAGG AAAGGCCCCT TGTGGGTGGG ACCATCTCTG GGCTGGTAGT CTTGGTTCTA 2340
TAAGAGAGCA GGCTGAGCAA GCCAGGGGAA GCAAGCCAGT AAGTAACATC CCTCCATGGC 2400
TTCTGCATCC GCTCCTGCTT CCTGACCTGC TTGAATTCCA GTCCTGACTT CCTTGGTGAT 2460
GAACAGCAGT ATGGAAGTAT AAGCCTCCCC AACTTGCTTC TTGGTCATGA TGTTTGTGCA 2520
GGAATAGAAA CCCTAAGACA CCACACAAGG GGAGAACAAG CTCCCACAAA TTGTCCTTTG 2580
ACCTCCATAT TTGTGACATG ACTTGTGTGC ATGCATACAT GGGTGCGCGT GCGCGCGTGC 2640
AAACACCCAC ACACAGATAA ATGTAAAAAA ATATACTTTG GCAATGCTGT TTTTTTTAAG 2700
CTTGGGAAAT TAATATTTTT GAACACTGCT GATGTGGGAT TTTAAGTTAC AGATGTTAAA 2760
CTTGTTCTCC 2770