EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-06741

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr17:35986040-35987230

Target genes

Number: 19
Name	Ensembl ID

Vars2	ENSMUSG00000038838
Ier3	ENSMUSG00000003541
Flot1	ENSMUSG00000059714
Tubb5	ENSMUSG00000001525
Mdc1	ENSMUSG00000061607
Nrm	ENSMUSG00000059791
Ppp1r18	ENSMUSG00000034595
5530401N12Rik	ENSMUSG00000087443
Gm16279	ENSMUSG00000084998
2310061I04Rik	ENSMUSG00000050705
Atat1	ENSMUSG00000024426
Mrps18b	ENSMUSG00000024436
Ppp1r10	ENSMUSG00000039220
Gm9840	ENSMUSG00000049832
Abcf1	ENSMUSG00000038762
Gnl1	ENSMUSG00000024429
Gm17414	ENSMUSG00000078821
H2	ENSMUSG00000067212
Gm4246	ENSMUSG00000092240

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr17:35986356-35986367	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr17:35986356-35986366	ATGACCTTGA	-	6.02
Nr5a2	MA0505.1	chr17:35986355-35986370	GATGACCTTGAACTG	-	6.97

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00590

chr17:35973690-36008049

pro-B_Cells

Enhancer Sequence

CCAGGTACAA GGAAGTCTCT CTGAATTCCC AACTTTGCCT GCTTTCTTGT TTTCTTCCTC 60
TGCATCCTTT CATATACTGT CTGTTAGATT TACCTATGTT ACATGTATGA GTGTTTTGCT 120
TGCATGTATA TATATATATA TATATGTTCA CCATGTGCAT GCCTGGTGCC CACAGTGGTC 180
AGAAGAGGTC TTATTCCCTG GAACTGGAGT TGTAAGCTGC CATGTGGGTT CTCAGGACTG 240
CTAGAGCCAC CAGTGCTCTC TCTTCAGCCC CTCATATTCT TGTTTGTTTG TTGACAAAGA 300
GTTCCTGTAG CTGAGGATGA CCTTGAACTG CTGGTTCTCC AAGGGCTGGG ATTACAGGTG 360
TGTGCCACCC AGCTAGGGAT GGACGAGGAC TTCATATGCT TGCTCGATGA GCTCTCTAAC 420
CACTGAGCTG TATCCGCAGA CGCACTTTTC ATATTCTTTT GTTATTCAAG AAAAGAACCT 480
ATACCAGACA TGGTGACACA CACACTTGTG ATCCCAGAAC TTGGGAAGCA GAGGCAGGAG 540
CCCAGGGCCA TCCTGGACTA CATAGAAAGT TTGAGGCCTT GACTGAATGA GACCTTGTCT 600
CAAACAACAA CAACAAATCC AACAAAATGG GCTTGGCTCA GTGGTTAAGA GTGGCAATCA 660
TCTTAGAGGA CCAGAGTCCA GCACCCATGT CAGGCAGCTG GCAACCATCT GTAACAGCAC 720
TTCTGGAGAT TTCATCACTC TCTGGGTACC CCACACACAC ATGGTATACA CATATACATG 780
TGAATAAAAA ATTTTAGAAT AAGTCTTAAA AAATAAAATA ACAAGTAAAA ATTAGATTGC 840
CTAGATTACT CTGATTCTAG TTCAGGAGAT TTGGGGTTAA CCCAAAAACT CAAAAATTTT 900
TACACTCTAC ATTCTCTCTG GAGATTTAAT CAGGGCTTTA TGCATGCCAA ATGAGTATTC 960
TCCTAAAATG AGTGTTTTCC TAAACCACAT CCCCAGTCCT TGTTTTTCAA ATGAAGTTCC 1020
TGAGGGAAGC TGTGCGTGAG GTTATAATCT CCTGAATAGC ATTCAGTGTT AGAACCACCA 1080
CCCTACTCCC AGCTTCCCTT TTGTAACCCA TGTAGCTGTT TGCTGCGAGC CTGCCTTCGT 1140
TCTCAACCTT AGTGCCTTTT TTACCTGTGT ACTTATCTCC TTTCTCTCAT 1190