EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-03540

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr12:56162180-56162940

Target genes

Number: 13
Name	Ensembl ID

1110002B05Rik	ENSMUSG00000044408
U1	ENSMUSG00000075960
Snx6	ENSMUSG00000005656
Cfl2	ENSMUSG00000062929
Gm20403	ENSMUSG00000092233
Baz1a	ENSMUSG00000035021
2700097O09Rik	ENSMUSG00000062198
Srp54b	ENSMUSG00000079108
Srp54a	ENSMUSG00000021020
1700047I17Rik2	ENSMUSG00000034953
Srp54c	ENSMUSG00000073079
Ppp2r3c	ENSMUSG00000021022
Psma6	ENSMUSG00000021024

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr12:56162840-56162852	TAAATCACAGCA	+	6.27
Gfi1b	MA0483.1	chr12:56162841-56162852	AAATCACAGCA	+	6.62
LEF1	MA0768.1	chr12:56162186-56162201	AGACATCAAAGGAAA	+	6.44
TCF7L2	MA0523.1	chr12:56162186-56162200	AGACATCAAAGGAA	+	7.34
Tcf7	MA0769.1	chr12:56162186-56162198	AGACATCAAAGG	+	6.07

Enhancer Sequence

CTGGAAAGAC ATCAAAGGAA ACTGATTTCA CAGAAGCTTC TTTTATTGCT AAATAAGGCA 60
GAACAGCAGT GGCCGCTCTG CTACACTCTG ACAACAGGCA GTGGCCGCTC TGCTACTCTG 120
ACAACAGGCC CAGAGACGCT GCTGCTGCTG CTGCTGCAAT CCTGCTTACT GCACCTCCTC 180
CTCCTTTTTT TTAACTGAGA CACTGATAAT TCTGTCTTTA ATCTGGAAGA TCACAAAACA 240
TGGCTAAGAT CTAACTCTGA GTCTTACATA TCAATTACCA TCAAAATACC TGGCAAGTTA 300
TATTTATTCA GAAAGTCAAG CTTTCAAATT GCTAAAATAT TATTAAAACT GCACGTTTAT 360
ATATGTGCGC ATGGTGCTTT CCATTTGTAA TACCAGCATT TGGAAGACTG GGGCAGGAGT 420
GTCTGAATCT GAGGCAAGCT TAAGCAATAT AGTAAATTCA ATGGCCAGCC TGGGTCACAG 480
CCTGTATCAA AAAACAAAAC AGGCTGTGTG TGGTAGTGCA TGCTTTGATC ACAGTACTTG 540
GGAGGCAGAC ACAGGCAGAT TTTGAAGGTA GCCTGGTCTA CACAGCAAGT TCTAGGCCAG 600
CCAAGGCTAT AGTGAAACTG TCTCAAAAAT AAATAAGTCA GACAGTGGTG GCACATGCCT 660
TAAATCACAG CACTCAGTAG GCAGAAGGAT CTGCGTTCAA AGCTTGCCTG GTCTACAGAG 720
AGAGTTCCAG AGAAGCTAGG GCTACACAGA GAAATATAGA 760