EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-02979

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr11:102967540-102967970

Target genes

Number: 14
Name	Ensembl ID

Gjc1	ENSMUSG00000034520
Eftud2	ENSMUSG00000020929
Ccdc103	ENSMUSG00000020930
Gfap	ENSMUSG00000020932
Kif18b	ENSMUSG00000051378
C1ql1	ENSMUSG00000045532
Nmt1	ENSMUSG00000020936
Dcakd	ENSMUSG00000020935
Plcd3	ENSMUSG00000020937
Acbd4	ENSMUSG00000056938
Hexim1	ENSMUSG00000048878
Hexim2	ENSMUSG00000043372
Fmnl1	ENSMUSG00000055805
Arhgap27	ENSMUSG00000034255

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr11:102967682-102967693	ATTTTAATTAA	+	6.62
Lhx3	MA0135.1	chr11:102967707-102967720	TAATTAATTAGTT	+	6.22
Lhx3	MA0135.1	chr11:102967686-102967699	TAATTAATTAATT	+	6.78
Lhx3	MA0135.1	chr11:102967703-102967716	TAATTAATTAATT	+	6.78
Lhx3	MA0135.1	chr11:102967687-102967700	AATTAATTAATTA	-	6.78
Lhx3	MA0135.1	chr11:102967704-102967717	AATTAATTAATTA	-	6.78
POU6F1	MA0628.1	chr11:102967688-102967698	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr11:102967705-102967715	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr11:102967688-102967698	ATTAATTAAT	-	6.02
POU6F1	MA0628.1	chr11:102967705-102967715	ATTAATTAAT	-	6.02
mix-a	MA0621.1	chr11:102967708-102967719	AATTAATTAGT	+	6.62

Enhancer Sequence

TCAAGCAGGT GAGTCCTTCC TTCATGTCAA GAGTGGAGAT TACCTCAGAA GTCTACTCTT 60
GGTTCCTCAG CCAGCTGCTT CTGGCTTGGG CCCCGTGACT CCCAACTGTC CACTGCTTTG 120
TGCAGAGAAT AGTGAGACCT CTATTTTAAT TAATTAATTA CTGTAATTAA TTAATTAGTT 180
TTTTTTTTCC AAGACAGGGT TTCTCTGTGT AGCCTTGGCT GGCCTGGAGC TCCCTTTGTA 240
GACCAGGTTG GCTTTGAACT CAGAGATCCT TCTGCCTCTG CCCGAAAAGT GCTGGGTGGG 300
GTTAAAGCCA CCCAGTGGGA GTGTTTACGC CCTGAGGGAG TGTGGGAAGG GCATGCTAGG 360
AGTGGAGGAC CAATCCCTCT CTGCCTGGCC GCCTACTGGC TTGCTACTAA TTTGCTGATA 420
TTCTCTCCCA 430