EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-02942

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr11:102222770-102226370

Target genes

Number: 26
Name	Ensembl ID

Cd300lg	ENSMUSG00000017309
Mpp2	ENSMUSG00000017314
Pyy	ENSMUSG00000017311
Gm11585	ENSMUSG00000082045
Nags	ENSMUSG00000048217
Gm11586	ENSMUSG00000087339
Tmem101	ENSMUSG00000020921
Lsm12	ENSMUSG00000020922
G6pc3	ENSMUSG00000034793
Hdac5	ENSMUSG00000008855
BC030867	ENSMUSG00000034773
Asb16	ENSMUSG00000034768
Tmub2	ENSMUSG00000034757
Atxn7l3	ENSMUSG00000059995
Ubtf	ENSMUSG00000020923
Slc4a1	ENSMUSG00000006574
Gm11616	ENSMUSG00000087330
Rundc3a	ENSMUSG00000006575
Slc25a39	ENSMUSG00000018677
Grn	ENSMUSG00000034708
Fam171a2	ENSMUSG00000034685
Itga2b	ENSMUSG00000034664
Gm11628	ENSMUSG00000082487
Mdk	ENSMUSG00000081677
Gpatch8	ENSMUSG00000034621
Ccdc43	ENSMUSG00000020925

TF binding sites/motifs

Number: 19

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE22	MA0818.1	chr11:102225969-102225979	AACATATGGT	-	6.02
Foxd3	MA0041.1	chr11:102224932-102224944	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:102224936-102224948	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:102224940-102224952	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:102224944-102224956	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:102224948-102224960	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:102224952-102224964	AAACAAACAAAC	-	6.32
Klf1	MA0493.1	chr11:102223222-102223233	TGGGTGTGGCT	-	6.14
NR2C2	MA0504.1	chr11:102226263-102226278	GGAGGTCAGAGATCA	+	6.1
Nr2f6(var.2)	MA0728.1	chr11:102224166-102224181	AGGGTCAAGGGGTCA	+	6.3
Nr2f6(var.2)	MA0728.1	chr11:102224147-102224162	AGGATCAAGAGGTCA	+	6.45
OLIG3	MA0827.1	chr11:102225969-102225979	AACATATGGT	-	6.02
RARA(var.2)	MA0730.1	chr11:102224156-102224173	AGGTCAGAATAGGGTCA	+	6.31
RREB1	MA0073.1	chr11:102224062-102224082	GGTGTGTGTGTGTGGGGGGG	-	6.17
RREB1	MA0073.1	chr11:102224064-102224084	TGTGTGTGTGTGGGGGGGGG	-	6.38
Rarb(var.2)	MA0858.1	chr11:102224156-102224173	AGGTCAGAATAGGGTCA	+	6.06
Rarb	MA0857.1	chr11:102224165-102224181	TAGGGTCAAGGGGTCA	+	6.6
Twist2	MA0633.1	chr11:102225969-102225979	AACATATGGT	-	6.02
ZNF263	MA0528.1	chr11:102224467-102224488	CCTCCTTCACCTTCCTTCCCC	-	6.04

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03421	chr11:102220077-102228105	Bone_Marrow
mSE_06021	chr11:102216948-102228406	E14.5_Liver

Enhancer Sequence

CAGGTCCCTG GAAGAAAGGT GCAGTCTGAT TGAGGCACAG TAATGTCATA TATACATCAA 60
CTAGCCTCCT GTTGCTTCTG GGTCCCCCTA AAGGAGCTAA CGTTTAGTGC CAGAAGAGCC 120
CTGGGGACCT GAGATTGATC AGATGGAGGC AGTGGCCATG GAGGAAGAAG CAGAGTTTGT 180
AGGTGTATAG GCAGGGGCTG AGGGACAGGA GACATAGGTA TGGCTGAATT CTCCTTAGTG 240
TGTTTGGGGT GCATGGTCTA ATGGTGTCTA GCCCCACCCT TTATCCACCA GGCCTTAACT 300
AACTTCTCTT TCTGAGCCAT GAGGACTCAG CCAACTCCCA GAACATGATG TATCCCCTCT 360
TCAGGGAGCC TGGCTCCCTT GAAAGTCTCC ATAACACATC CTCTTCTCCT AGAGATGGCA 420
GCTTCTGCCT GGACAACAGG CTGCAGCATC CTTGGGTGTG GCTCGCAGAT CCTGAGGGAC 480
ATGAGTCTGT GTTCTCTTCT TCATTCCATC CCTACCTCGC TGGCGTGCTT TCTCCTTAGT 540
CTATTGGCTT CTATCCAGTT CCTAGAACTC ACCAAGACCT TGCCTACTCC AGGGCCTTTG 600
CACACTCAGT GTCTCTTCTG TCAACAGCTC AGCCCTTCTC CTACCTCAGT TCCAGTACCA 660
CCCTTTCACA GGTCCCCCTT AACCACCCCG ACAGTTGCTG ACCCACTCCA ACGTGGTTCC 720
TTAGTTAACT GGTGTGCAAT TGTCAGACAC GTCCTTTGGA AAGGAAGACA CCTGAGTGTA 780
AGTCCCTGCA CATTTCTGTC CTCATGGGGT CCCCACACTT AGCAGCCAAC CTGACTCCAT 840
ATCACAAACT CAAAATGACC AAGATCCATC CGGAGGCCAC AGAACCTCAG CCTCTATTTT 900
CTCAAGACAA AGATGTCCCT ACCCTAGGAT GTGGGGACCA GTCATCTAGT GTGCCAGTCT 960
GGTGCTTCCT TTGCCCTGTC ATTGCTACAT GGAACTTTGG GGGGACAAGC ATTTGGGTAG 1020
GTTCATGAAA CGGAACCACT GGCTGAGTAC AACAGACTGA GCTGAGCCGG GCTGAGCGTG 1080
TCCTTACACT TCAGGTGACC TAAATGAGTG TGTCCTTACT CTTCAGGTGA CCTGAGTGTT 1140
TCCTGCATGG ATGGAATCTA GGGGGTTACC TGTGCTGGAC ACCGCAGAGA GGAAAAATGG 1200
GATAGAGGTA CAGGGCCAGT GACCACAGCA TGGGTCCCAA GACCTAGGTA AAGAGGACCA 1260
GCTTAGGCAT AAGGCATGGA CTAGGACAGA GAGGTGTGTG TGTGTGGGGG GGGGAACAGA 1320
GGAGCAGGGG CCAGCGAGTG GAGGGCACGG GGAGCAGAAG ACAGAAAGCC AGAGGAGAGG 1380
ATCAAGAGGT CAGAATAGGG TCAAGGGGTC AGAGGCAGAG GGGTAGAGGG TGACGGGCAG 1440
AGGTGTGGAG GTAGGGCCAC ACAGTCATGC TAGGGACCAT GTAAGAATCT GGGGCAGAAC 1500
ATACATTTGG AAAGAACCAT ACAGAGGTCT CTCTGGGCCT TGGAGAGTCC TGAGGTTCTG 1560
AGAGGGAGAG ACATCATCAA GTCTTTAGGA GTGGCAAGTG ACCTCCATGG CAGTGTTCCT 1620
GAGCCTGAGA ATGGGACAAC TCTCTGGGCT TTCCCCTGGG GAGTTAGTAT TCACCTTTCC 1680
CCTTTCTGCT CTCCCCACCT CCTTCACCTT CCTTCCCCCA TGGCTTGCAC CCAGTTTCTC 1740
CAGTCTATCT TTAGTTTTCT TCTTTCCTTC TCTGGACCTG TTCACACTGC TTTCTGGCTG 1800
GGCCTCAGAT CCCAAGGTAC CAAAATAACA CTGTGGGACT GGGTCTGGTG CCTTGAATCT 1860
CCTAAGGGTC AGCATGGCAC AGCCAGGGAT CCAGAGCCCT AGGCTGTGTC CCTGATCCTG 1920
CCTAGACCAA TGGCCTGGGG AAGCTCTTGG GTGTTTAACT CTGCCATCGG TCTGTCAGAT 1980
GCCAACCTCT GGGAACTCAG TCAGAAAGAG TAAAAATATC AGAAGCAAGC CGGGCGTGGT 2040
GGCGCACGCC TTTAATCCCA GCACTCGGGA GGCAGAGGCA GGTGGATTTC TGAGTTCGAG 2100
GCCAGCCTGG TCTACAGAGT GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGCC 2160
TCAAACAAAC AAACAAACAA ACAAACAAAC AAACAAATCA GAAGCAACCT AGAGTCCAGC 2220
TGAGCCTTGG AGGGTGTGCC AGGCCCAGGC TGTTGCCTGC TGGTCCTACA CTCTTAGCCC 2280
TGCCCCACTC TGCCTGGACC TGATAAGAGC CTGGGCCCCT GAACCTTCAG AGCTCTGAGT 2340
TTGGAAGCAC CCCAAACACC TGGAGGGCCA GCTGCCAGCC AGGACAGATA AGGGGCGAGC 2400
GGGCCATCTG GAGCCCAGGA GGTGGAGCCC AGCTGGGAAG ACACAGGGGG AAGGGGACAG 2460
ATGACAGGGA CAGCTCCCTG GTGGCACAGT ACTACCTTTT TACTGTCAAC CCCACACCTC 2520
ACAAGCAGCT GTAGTGCCCT CTCTCTCTCC CAGTCCCCAG ACCACCGACA CCAGTAAATG 2580
TCAGTGGTGC CATTTGACAA AGCCAAGATT CAGAAGAGTT CGCCTACTCC AGGGGCACTG 2640
GATGGATCGG AAGCAGGATT AAATCTTTGG CTTACAATTC CACAAGCCTC TCTACCCGCT 2700
GCACTGAACT GCCTCCCAGA GAAGAAAACA GCTCTTAGCT GATTGGGAGT TGGAAGTTCA 2760
GACATGGCCT CTCACCTCTG CAGGCAGACT CCCTGAGTTT ATTTAGTTCT GACCCTGTCC 2820
TTTACTAACT TTGTGGGCTA AGGAAGGTGA CGGAATACCC AAGCCTCAGG GGTTTTTCCG 2880
TCTGTAAAAC AGAGCTGGTA AGAATGATTC CTGCATGATA GACCCACTGT GCAGATGACG 2940
TTCATGCCGA GAACACATGG CCGGTGCCTG GCACACAGTC TGTCATCACT CCTGCCTGCC 3000
ACTGATGACC AGGTCAGTCA GGCTTGTGAC CTCCATCCCG CCCCAATTTT CCTCCAGTTC 3060
CTATAGAGTT AGCCTGAGAT GATCAACCCT CAGTAGAGAT TCACTTCTCT TTTCCCTTCC 3120
AATGGTCTGT GGGCTGGGGG TAGCGCCAAG GCCCCAAGAA GACCCCTAGA AATGTCCCAT 3180
ATAGGAATCA ATGCTGGCTA ACATATGGTC TCCCAGGCGA GAGATGGGGT AGCCTGGGGA 3240
TGCCCCACCC AGGTGAGAGA TGGGGTAGCC TGGGGATGCC CCACATCTGG AGGAAATGAG 3300
GCTTGAGTCA TGGGGCTGGT AGATAGAAAG CAGGAGGGAC CTACACCGGT GGAAGGTCTC 3360
AAATTAGCTT CCAACGTGCA CTCCAGCTAC ACACACCTCT GTATGATAAC TGCCCCCTCC 3420
CCAACCCTCC ACTCCCCGCC ATAGGTGCAC CGAGGGACCA AAGCACATGG ACACATTACC 3480
CTCCCATCCA CCTGGAGGTC AGAGATCACA CCCCTTGGAC ACAGATTTAA GCTGACCACC 3540
TTCACAAACC CTCGGGACAG ATGCCAAAGG ACCACCCAGC CACCCCCCTG CCCTGCCCAC 3600