EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-01655

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr10:128358740-128359700

Target genes

Number: 17
Name	Ensembl ID

Cs	ENSMUSG00000005683
Smarcc2	ENSMUSG00000025369
Pa2g4	ENSMUSG00000025364
Rps26	ENSMUSG00000025362
Ikzf4	ENSMUSG00000002578
Cdk2	ENSMUSG00000025358
Mmp19	ENSMUSG00000025355
Tmem198b	ENSMUSG00000047090
Dnajc14	ENSMUSG00000025354
Ormdl2	ENSMUSG00000025353
Sarnp	ENSMUSG00000078427
Gdf11	ENSMUSG00000025352
Cd63	ENSMUSG00000025351
Rdh5	ENSMUSG00000025350
Bloc1s1	ENSMUSG00000090247
Itga7	ENSMUSG00000025348
Mettl7b	ENSMUSG00000025347

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr10:128359367-128359385	GGAGGTGAGGAAGGAAAG	+	6.37
FOXP1	MA0481.2	chr10:128358846-128358858	AAGTAAACAGAA	+	7.22
FOXP2	MA0593.1	chr10:128358846-128358857	AAGTAAACAGA	+	6.32
Myod1	MA0499.1	chr10:128359526-128359539	TGCAGCTGTCGCC	+	6.52
Myog	MA0500.1	chr10:128359525-128359536	CTGCAGCTGTC	-	6.62
Tcf12	MA0521.1	chr10:128359525-128359536	CTGCAGCTGTC	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00673	chr10:128346637-128375944	Myotubes
mSE_09759	chr10:128354480-128361503	MEF

Enhancer Sequence

TTTTATTTTC TGGAGAATAG GAGCTGTGGG GAGCAACACA AAACCCTTTC TAATCAGGAT 60
TTGGCTTAGG TGCCCTCTAA GCTTCGAATG TGGGGTGGCG TCTAGCAAGT AAACAGAAAG 120
AAGTCTGGCC AGCGTCACAA ATGTAGCAAA GGATGTGCCA GTGTGGGAAC ACCAGAGAAG 180
AGGAGGAGAG AGCTGTCTGG AGACAAAGGA GACCAGAGCC CCCAACCACA GCCATTCTTC 240
CCCCTAATCT CCCCTCAAGA TGAGTAATGG TTGATGACCC TAACCCTGCA TGACTCCCTT 300
GGATGAATCA GTCTCTGGAT TTGCAACCAA GCCTGTCACT CGCCCTGGGC GGAAGGCATA 360
GTATGTGCCT CCTTTCTTCC CATAGACAAT CAGATCACCA TCTCTGCACT CTTATGAGTC 420
ATGCAGGGCC AGGGAATCTT TCCAAGTCTT TGGATACCAC TGGTCTTCTC ATTGAGGGTT 480
AAGGTTGGGG GAAGGGTCCC TGGAGACCCA GAAGGAAAGG AAGAGACAGC CTGGTTTTGT 540
CACAGCTCTT GGCTTAGGCT CTTCCTTACT TCTACCAGCT GTGCCATCCT GTTCCTGCCA 600
TTTGTTTCGC AGGCTTTCCA GAGAGTAGGA GGTGAGGAAG GAAAGAGGGT ACGTGGTGGA 660
AGAGGTTGTC CTTCCCTCCC ACCCAAGTGA CAGCTGGACA TATAAGGGTT AGTCGAGTTG 720
GCCAGATGGC ATCAAGTTGT GCCAGGGAAG TTAGTGTGGG GAGGGGAATT CTGTTTTCCC 780
AACCACTGCA GCTGTCGCCC CCATCAGCGT TAGAGAGTGA AAGCTGACTC AAGTCTCCAC 840
AAAGTTACAT TAGGGGGAGG GGACAGATCA GAGGAGTTAC TGGAGCACCG GGTCCTTCTG 900
AAAGCTGGCC CAGATGCTGT GTAACCAGGG TGGATGGAGG AAACCGGAGT TGAGGGAAGA 960