EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-00603

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr1:173204510-173206010

Target genes

Number: 27
Name	Ensembl ID

Gm2962	ENSMUSG00000089838
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
Alyref2	ENSMUSG00000060244

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU1F1	MA0784.1	chr1:173205053-173205067	CTGATTTGCATAAT	-	6.87
POU2F1	MA0785.1	chr1:173205055-173205067	GATTTGCATAAT	-	6.22
SOX10	MA0442.2	chr1:173204774-173204785	TGCTTTGTTTT	-	6.02
TFAP2B	MA0811.1	chr1:173205626-173205638	AGCCCCAGGGCA	+	6.11
TFAP2C	MA0524.2	chr1:173205626-173205638	AGCCCCAGGGCA	+	6.11

Enhancer Sequence

TGCTACCAGG TCAGACTTCT TGCCACATCT CTTTCTCAAA CCCTGACCAC AGTTTTCAAC 60
ACAACCCCTG AGCCTCTTGG TTCTGCACCA AGCCCACTCT CGCCTTTGAC CTGGGCAGGC 120
TTTGCCCATC GCTGCCCATT CTGCCAAATT TCCATTTTCT AGGTAGATCA GGTTGATGAT 180
AGTCTTGGTA AAGGGGGGAA GATCAATTGG AAATATGGGA TATGAAATTC TAGATCTCAG 240
GAGGGGGTCT AAAAGACAAG TTAGTGCTTT GTTTTCCTAG ACTTCCAAAG AAACTACTTC 300
TGTGAGAATG GGGGGAGGGG TTCCGCTCCC TAGAGCCCCA GATCACCCTT GTTTGGTTTT 360
GGTTTTGTTT GGTTTTATGA GACAGGGTTT CTGTGTAGCC CTTGGTATCC TGGAATTCAT 420
AATGTAGACC AGGCTGATCT TGAACTCACA GAATCTACCT GCCTCTGCCT CCAGATGCTG 480
GTTTAAAGCA TGCAGCACTG CTGCCTGCCC ATCTTTTTGT TGTTGTTGTT GTTTGGCGGG 540
GGACTGATTT GCATAATGCC AACTCACTTC TTAGCATGTG AAACATTCCT TACCTTTAGC 600
CTCCAGTGAA CTGGTTTTGT GTGTAGTACG TTTGAGCTTA GTATGCTGCA ACCATTGCCT 660
CCCTCCCCTT AATGTCCCCT GAAATGACAT CTTTATGTGA ATTCTCATCT CCGTGTAGGT 720
ATTTCATATT GTGAAAATCC TAGATGTATT TCTTTCATTT CAAACCACTG TCACCTCTCC 780
TTGCCTCTGT GTTTCAGGTC TGGCTTGTTT TAAGGTCCGG GTTATCCCTC GGCTGCCGCT 840
CTGCTCTTTC CCACATGGCA GCAGCTGGGA AGGAGCTGGG TAGCTTAGAC ACTATTTCTA 900
AGTAAGAATT GCTCGGCTAG GGAGGCAGCT TGGTGGTCAA GTGTGTGCTT AGCATCCGTA 960
AGCCCCACTT TCAATGCCCA GCGCCAACAA GAGACGGAGA TACTTTAGAC AAAAGGGCCC 1020
CTTTCTCTAT TCTCCCAAGA CTCCACGGGT GGTTTCTAGG AGCCATTTAG AAAGAAGATG 1080
CAAGAATTAA GAATCTACCT TTGCCAGTTG TTGTAAAGCC CCAGGGCACC TGGCACCAGG 1140
CCCTGCGGAC TTACACAGCC AGCCTTACCT TCTTTCTGTT TGCTTTTGTC CCGCCTTGAC 1200
ATGCTTGGCA GTATTTATTT ATTTATTCTT CCTTGCCAGA CAAGTAAAAT CGCTTTCTGT 1260
GTCCCAGCCT ATACCATCAC TCTCTGTGTG CCCCAGCCTA TGCCACCACT CTATCTGTGC 1320
CAGCCTATGC CATTGCTTTC TGTGTGCCCC AGCCTATGCC ATCAATCTCT GTCCCAGCCT 1380
ATGCCATCAC TCTGTGCCCC AGCCTAGGCC ATCCCTTCCT TAGTGGGTCT ACTTTTCCCA 1440
TTCACCCGAC AGCAGCAGTT TTCCACTCGA GCACCTCCAA GACTCCCTCA CTTTTCTCAC 1500