EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-00578

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr1:172537960-172539710

Target genes

Number: 6
Name	Ensembl ID

Sh2d1b1	ENSMUSG00000026673
1700015E13Rik	ENSMUSG00000042800
Nos1ap	ENSMUSG00000038473
Olfml2b	ENSMUSG00000038463
Ppox	ENSMUSG00000062729
Pfdn2	ENSMUSG00000006412

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:172539495-172539506	AAAGATAAGAA	-	6.62
Gata4	MA0482.1	chr1:172539567-172539578	AGGAGATAAGA	-	6.14
IRF1	MA0050.2	chr1:172538994-172539015	AGAGAGAAAGAGAAAGGAAAA	-	6.99
Mecom	MA0029.1	chr1:172539491-172539505	GAGAAAAGATAAGA	+	6.03
Nr5a2	MA0505.1	chr1:172538424-172538439	GAGTTCAAGGCCAGC	+	8.25

Enhancer Sequence

AAAACAAATG AATGCCATAT TTGGTCACAA TTAAGATCTA CCTGAGTCCA TTTGAGGCCT 60
GGGCAATGGA TACCCAAGGC ACTTTTATAG TTATTCCCAT GAAAGTTTTG ACAGGTTTTA 120
TTGAATGAAG GATTTCATGA AGCTGGTTTC AAGCTGAATC CCAAAGACAG GGAAAATTTT 180
TCTTGTATTT ACCAGGTGCT TGGAGATCGA TGTTACCTCA TTATGCATGA ATTTAGGGAA 240
CACCTAACAG ATGCCGTTGT TACATAAGAT TTCTGGCCAC ATGGTCAGTC GATATTTGCT 300
AGTTGCTAAC TCTGTACTGG ACAATAAAAA AATAGATGAA ATAATTTCTC TTCTCAAGAA 360
ATTCACCTTG ATCTAAACAA GGAGTTAACA CTGACCTCAC AGCCCCAGAA TAGCAGTGCA 420
TGCCTGTAAT CCCAACCTAG GAAACTGAGG CAAGACAATG CCATGAGTTC AAGGCCAGCC 480
AGGGCTACAT AGCAAAACCC TCTCTAAATG ACCAGACAGG ACTGGTATGC AGGTATTTAC 540
ATGGTACAGA AATAAAACAG AAAAACTAAG GGGTCAAAGT GACTCCAGAA ACTAAAGAAT 600
AGGTGAGGTA TTCTGTGTGG CAGCTAGAGG TGGGGGTGGG GGATGTAGAA CCAGGGAAAG 660
TGTCACGAAG GATGCAGTAT TTGAGCCCAG CACTGAGGAA TTCTATTACT TTCATAAGCA 720
AGAACAGAAA AGATCATTCT GGACAGAGAG CAGAGCCAAT CAGGCTGCTG CTATTGGTCC 780
ATGTGCTTGA GACCAGAACC TCCTCTCCAA ATGCATGTTG ACTTTTGCTC TACCAGCTGA 840
GTCCTGTTCA GTTGTCCAGT GAGCTCTTGG GCCTTTCCCA AATTAACTCC AGGACCTTAA 900
GCATAGAGGT TTAGGAGGAC ATGAGCCAGG CTTCACGCCT CTCCTGAACT CAGACCTCTG 960
TCCTATGACT ATACATCTCT GGCCAGAAAG GAAGAGCACT CCACAAAGGC CTTCCCTCTC 1020
CTGTTACAGC CGTTAGAGAG AAAGAGAAAG GAAAATGTTG TTCCTCATTT TGAGATCATA 1080
CAGAAAAAAT GATAAAGTCT AACTTGTCCA TGGGATTGTT TCTGCATTTG CTCATGTAGA 1140
GATACTCACT AGATATACTG TACACAAATA TAGTTATAGA CATATACAAT GGAGAGACAA 1200
GCAGACAGAC AGACAGACAC ACATGCACAC ACACACACAT GACTCCAACA GCAAATATCT 1260
ATAAGAAGAT AAATGTAATA TGTTGTATAT ACATGATTAA TTAACCCTAA AAAGAAAATA 1320
ATTCCTGGGG CTGGGGAGAC CGTTTCTGTT CCAGAGGAGC CAGGTTCAGT TCCCAGCACC 1380
CACATGGTGG CTCACAAGCA TCTGCAATCC CAGTGCCAGG GGATCTGACT CCTCTTCTGA 1440
CCTCTGTGAC CTCTGACCAG GCATGGGTGG GGTACACTGA AGTACATGCA GGCAAAACAA 1500
CCTTACACAT AAACACAAAA CAAAATAATG AGAGAAAAGA TAAGAAAATG AAGATAACTC 1560
TTAGCTGGGA GTGGGGGTGC AGATCTAACA CTCCGGCGCT CAAGAGCAGG AGATAAGAGG 1620
ATCATTGCAG GTTCAAGAGC AGCCTGCTCT ATATAGCAAC TTAGGTATGT TTCCAAGCCA 1680
GCTAGTGCTG CATGGTGAAG TCCTTTTAGG TGTCCAAAAC CTAAAAAAGC ATAGAAAGAA 1740
AGAAAGAAAG 1750