EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-00464

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr1:136421650-136424180

Target genes

Number: 11
Name	Ensembl ID

Btg2	ENSMUSG00000020423
Myog	ENSMUSG00000026459
Ppfia4	ENSMUSG00000026458
Tmem183a	ENSMUSG00000042305
Cyb5r1	ENSMUSG00000026456
Adipor1	ENSMUSG00000026457
Klhl12	ENSMUSG00000026455
Rabif	ENSMUSG00000042229
SNORA61	ENSMUSG00000077202
4931440L10Rik	ENSMUSG00000046367
Kdm5b	ENSMUSG00000042207

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr1:136423783-136423798	TGGCCTTTGCTCTTT	-	6.38
HSF1	MA0486.2	chr1:136421768-136421781	GAACCTTCTAGAA	-	6.74
HSF2	MA0770.1	chr1:136421768-136421781	GAACCTTCTAGAA	-	7.12
HSF4	MA0771.1	chr1:136421768-136421781	GAACCTTCTAGAA	-	7.04
IRF1	MA0050.2	chr1:136423002-136423023	TTTTTCTTTTTCTTTTTTTTT	+	6.09
IRF1	MA0050.2	chr1:136422996-136423017	TTTTTCTTTTTCTTTTTCTTT	+	6.17

Enhancer Sequence

AGACAGCCAT GTGTTGGTAG CTAGAGACTA ATAGGCCATG TCAGGAAGGC TTCTGTTTCA 60
TGATGTACTT GACAAGTCCA CGGGCATGGG TGGCTGACTT GTGCTCCCTG AAGGTAGAGA 120
ACCTTCTAGA AGACAGATTC TGCTCTTAGT AAGACCACTG AGCAGAACCC AGCCCTGCCC 180
CAGTCCCAAC CAGAGGAATG GGAACCCTCA ATACTCTTAA CCTACTCTGA GTTTGGGACT 240
TTAATTCTGG GGTGACACTG TTCATGCCTC TGCTATTTGG GGTGGGTAGA TTCTTGTTGG 300
CTGGTTGGTT GGTTTTGTTT GGCCTTTGAT ACAGGGCCTC TCTAGAGCCT ATGTTGATCT 360
CGAACTCATG AGCTTTCTGT CTTGCCTCTC TCGGGTGCTG GGCTGGGGGA GTCCTGCTGT 420
GCCTGGCTCT GGGCAGACTT TAAGCACTAA TGCACTTTGA TGTTCCCTGG GAATGTCACT 480
TGTGGCCTTG CTTTGTGTTC AGGAGAATAG GACTATCATC CACTCCACGG AGAGACAGAT 540
TACCTGTAAT CAGGGTTGCC TGATCGACCC CCAGAAGGGT TTTGTTGAAA CCATAGTTCA 600
GGACCTAGGT CTATAGACTT GACCTCCACG GAAGAGCTAT ATAAACTGCT GTTTGCACTG 660
AATTAGATCT GTGGACCTGC TTAAGTGACA TTCCCTGGTG CTGGCTCTCT CTACTTCCTA 720
TCTTCCAATG TTTGGAGTTG TGAGTGGAGA GATCTGACAG TCCCTTGCTT GGCTCTGTCC 780
TCTATTCCCT ATCAACCTGA CCTAGAACTC AGGGCTCTCA GCCTATGCTA CTCAGTCCTC 840
TTGAATCTGA TGGCCCAGAT GGCTTGGGCT TGTCTCTTTT TGATTCATGT TCCCTTTCCC 900
CATTTTAAAC AGCACCAGTT CCCACTGCTG TACCTTGGCT CCACAACTAT ATCCATGGTT 960
AGCCCTCTAT CTGGGAATAT TTTCCTCCAA AGCTGTTTCT GACAGCCAAC CTGATTCTCC 1020
ACTGCTCCTA GGGCTGGAAC CAGAAGGATA GTTTCCATAC GGGAAGGGAA AGAGGTTAGG 1080
CAAAGCTGCC TTATCAAAGT ACCTAGAAAG GATGCCGTCT TAGGGTTTTA CTGCTGTAAA 1140
CAGACACCAT GACCAAAGCA AGCAACTCTT GTAAGGACAT TTAATTAAGG CTGGCTTACA 1200
GGTTCAGAAG TTCAGTCCAT TATCATCAAG GTGGGGACAT GGTGTCATCC AGGCAGGCAT 1260
GGTGCAGGAG AAACTGAGAG TTCTACACCT TCATCTGAAG GCTGCTAGCA GAATACTGGC 1320
TTCCAGGCAG TTAGGATGAG AGTTTCTTTT TCTTTTTCTT TTTCTTTTTT TTTTTTTTTT 1380
TTTTTTTTTT TTGGGTTTTT GAGACAGGGT TTCTCTGTAT AGCCCTGGCT GTCCTGGAAC 1440
TCACTTTGTA GACCAGGCTG GCCTCGAACT CAAAAATCCG CCTGTCTGGA TGAGGGTCTT 1500
AAAGCCCATG CTCACAGTGA CACACCTACT CCAACAAGAC CTCCTAAAAG TGCCATCTCC 1560
CTGGGCCGAG CATATTCCAA CCACCATAGA TACAGATCCA TTCATCTGTG CTGCCCATAT 1620
CTCCATGGAC AAATGGGTGA GATGGCATTT CCTTTCTTCT TTTCCCCCTC TCTAGGTACA 1680
TAAATTCATC TGCAGTCTCT ATAAGTTCCT ATCACAAAAG AGACCACGCC TCCCACACGC 1740
TGCCCCAGGC AACAGGAAGG AGAGAAATCC AGTGAGGGCT GGACACCTAA CCTCAGTACC 1800
CTTTGTGATG AGTTCCCTAC AATGTAAGTC GGTTATAGGT GCAAGGAGCA AGCTAGAGCA 1860
TGCTCTTTGA TAAACCAGCT GCCGCCTGGT TAAACAAGGA AACGGGGTCA TGACACACAG 1920
CCAAATAAAG AGGTAGGGTT ATTACATATA GATAAACAGA GAGGCAGGGT TTAGGGTGTA 1980
CAGCTGGATC AAGGAGGCAG GGTTAGCTTA TCTCAGGAGG AGCAGCCACT GCAGGGAAGC 2040
AGTCTTCAAG CCTGAGATAT CCACGGAAGA GAAAGGTTTG GTGGGCATAT TATACACATA 2100
CTCAACATCC ACACATGGAC TACAAGGAAG GCTTGGCCTT TGCTCTTTGG GTCAGAGCCT 2160
AGGGTCCTGA ACATGGTTGT GCCTATGCCA ATAATACACA TTTGCTAAGG ATGTCACAGA 2220
ATCCAGGCTC TCTACACTCC CCACAACCTC ACAACCTCCT AATTTTCTTT TTGAGGGGAG 2280
TGGAAATTGG CTTTTCTGAT ATGGGGGTCT CATGTAGTCC AGGCCAGACT TGAGCTCACT 2340
GTCTAGGTAA GGATGACCCT GACTTCTGAT CGTCCTGACT CTGCACCTCT GGCTCCACTC 2400
TGTTTTCCTA CACATTAAAA TAAATAGAAA CAAAGCTGGG TGTGTTGGCT CCACTGGCTT 2460
CATCCCAACA CTCTGGAGAT CTCTGTGGGT TCCAGGCTAG TCAGAGTCAC ACAGATTGTG 2520
TTTCAATAAA 2530