EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM092-00144

Organism

Mus musculus

Tissue/cell

Liver_E14.5

Coordinate

chr1:72290440-72291090

Target genes

Number: 7
Name	Ensembl ID

Mreg	ENSMUSG00000039395
U2	ENSMUSG00000075752
D230017M19Rik	ENSMUSG00000085769
AC120136.3	ENSMUSG00000093333
Pecr	ENSMUSG00000026189
Tmem169	ENSMUSG00000026188
Xrcc5	ENSMUSG00000026187

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:72290546-72290557	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:72290547-72290557	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr1:72290544-72290561	GAGGGGGCGGGGCATGC	-	6.5
SP3	MA0746.2	chr1:72290487-72290500	GAGGGGCGTGGCG	-	6.18
SP4	MA0685.1	chr1:72290543-72290560	CGAGGGGGCGGGGCATG	-	6.18
ZNF263	MA0528.1	chr1:72290695-72290716	GGGGGAGGCAGGAAGTGAGGG	+	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03263	chr1:72282943-72301822	TACs
mSE_10125	chr1:72288734-72291052	Embryonic_stem_cells

Enhancer Sequence

CGCGGAGGCC GCGGGGAAGA GCTGATTTGC ACGTCCTGCC TCCACGCGAG GGGCGTGGCG 60
ACGTGCACAG GCCTAATTTG GGCTTGTGTT GTCACGCCCT TCGCGAGGGG GCGGGGCATG 120
CAAATCATAC TCGGCGTGCG CGCTCGGGAA CGCCGGGAGA GCCCGGGTCG TGGACGTTGA 180
ATCTGAAGCC GTGGGTGCTG GAGTGGGAGT GAGGTGTGGA GGGCGCAGAC GCGGATCGGA 240
GGAGGAAGGA ACCGCGGGGG AGGCAGGAAG TGAGGGTTGC GAGCGGTCAC CACAAAGGTA 300
ATGTGTCTCA CGGACGCAGA GCATGGCTGC GTGGTCTGTA TTTGGTATCG CTTCTCGGCC 360
TTTTGGCTAA GATCAAGTGT AGTATCTGTT CTTATCAGTT TAATATCTGA TACGTCCTCT 420
ATCCGAGGAC AATATATTAA ATGGATTTTT GGAACTAGGA GTTGGAATAG GAGCTTGCTC 480
CGTCCACTCC ACGCATCGAC CTGGTATTGC AGTACCTCCA GGAACGGTGC AACCCCTCTG 540
GGGAACAATG TTGGTTAAAT GTAAGACATT TAGGACTATT ATAGCTCGTA AATACAGGCT 600
GCAGTTACTT TTTCTGTCTT CTTTTCTACT TTGTAGTTAC CCGGGTCTCG 650