EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-19716

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr6:128187420-128188090

Target genes

Number: 9
Name	Ensembl ID

Tspan11	ENSMUSG00000030351
AC144778.1	ENSMUSG00000076327
Tspan9	ENSMUSG00000030352
Tead4	ENSMUSG00000030353
Rpl18	ENSMUSG00000053173
Tulp3	ENSMUSG00000001521
Foxm1	ENSMUSG00000001517
Nrip2	ENSMUSG00000001520
Fkbp4	ENSMUSG00000030357

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr6:128187445-128187466	GAAAAGAAAAAGAAAGAAAGG	-	6.31
REST	MA0138.2	chr6:128187960-128187981	CCCAGGACCAGGGTGAGCACC	+	6.22

Enhancer Sequence

AAAGGGAGGG AGGAAAGAGT TTAAAGAAAA GAAAAAGAAA GAAAGGAGGA AGAGTGACTT 60
AATCTCACAG GAACCGCTAA GCCCAAAAGC CAGCTGCCTG CAACAGGGTG AGGGCTCTCA 120
TAGCCACCAT GTGCTGCGCT GGCCCAGGTC CAAGACTTGC TATGGAGTTT GTGCTGCCAG 180
AAGGCAATGG CCTTGTGGGT TTTTAATACA GCCCTATCCA AGCATGTCTG TGGGACCTGC 240
CCAGTCAAAC TTCTGGCATC TGAGCTGTCC CAGCACCCAC TTCTTCTGTC AGTTCCCTCC 300
CCCCTATCCC CTAAGGGAAG GCAAAAGAGG AAATGGGCCT AACAAGGTAA CAGAGGGAGG 360
CTCTAACTCA CTTCCACCTG GAAGACTTTG CCAACGTTTC CTGGGAAGAA GGTTAAGATC 420
TAGAAAATCA AATGGCCCCA TTGCTCCCCT GCATGATCTC AGTGAAGTCT GACCTCGTCT 480
CTGTTACCAA CAACATCCCT TGGCATCCCT TGGAGTCTTT CAAACAATCC ACAGCTTCCT 540
CCCAGGACCA GGGTGAGCAC CAAAGCTGTG TCTGGGGGGC ATTGCCTGAC CTTGGAGCCT 600
TACTGGTGAG GTCTGCTGTC TGGCTCTAGT CCTCAGCAGA CTGGGTTAAG TCTGGTAAAA 660
TTGTCTACTC 670