EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-16562

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr4:131953460-131954710

Target genes

Number: 19
Name	Ensembl ID

Srsf4	ENSMUSG00000028911
Epb4.1	ENSMUSG00000028906
Ythdf2	ENSMUSG00000040025
Rps15a	ENSMUSG00000083757
U11	ENSMUSG00000077323
Snhg12	ENSMUSG00000086290
Snora61	ENSMUSG00000064949
Trnau1ap	ENSMUSG00000028898
Gm17300	ENSMUSG00000091021
Snora73b	ENSMUSG00000065353
Snora73a	ENSMUSG00000064387
Rcc1	ENSMUSG00000028896
Snhg3	ENSMUSG00000085241
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042
Atpif1	ENSMUSG00000054428
Dnajc8	ENSMUSG00000054405
Eya3	ENSMUSG00000028886
Rpa2	ENSMUSG00000028884

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr4:131953682-131953703

CAAGAGAAACTGAAAGGGAAA

7.2

Enhancer Sequence

AAAAAAACCT AATCCAACCT TTAAAACAAT CCCGTTTTTA TAAGTTGGCA GTTTTATTTC 60
TAGATCACAC TTAACACTCG CCGGAACTTG GAGAGTACCA GTAAGATACC TCTGACCTCT 120
AAGGAACAGC TCCTGTAACT ATTTTCCTCA GAGGCAAGAA ATAAACCAAT AGGTAACGAC 180
GTCCTAGCAA TCTAATCTTA AAACAAAACC CCAGAAGCAA GTCAAGAGAA ACTGAAAGGG 240
AAATGAATTT AACTGAGTGG GAACAACTTT AAATCTTTCA TTCATTTCTC GCAAACTTTA 300
ATAAACATGC CAAAGTCTTA TATTCCAATT TCTAAGAGAA CTAACTTCAG CTGAAGCCGG 360
CCTCGCTGCT GCTAAGATGT CTATTTTCCT GCCTTCCATT ACTCACCAAC TGCATCTGGA 420
TTTACCGGTC TGGAGACATC AGCTTGGCCC ATGATTATAA TTGTCTTAGA TGTATCCCAC 480
GACAACAAAC TCTTCCTGAC AAAAGCAAAC TTCTCTTAAA AGACAAATCC ACGTAAGGGA 540
CCAGCAATCC CGTATCACCA CCAAATGCCA GGAAACAGTG TGCGATCTGG AGTTTCTGTT 600
TTGCTGGACA CCGGGTACTT GTGGCTCTCA CAAACGTCTT CACGCCGGCT CTCTTCACAC 660
AGGAATGCCT GTCATTCCAG AGTGCAGTGT GTAGAGCACC AGTGCGGAAG GGGAGGAGAC 720
AGCCAACCAC ATTCTGGCTG CCAGCGGCAC AGCCCAAAAG CCCACACCCC CTTTTCCTGA 780
CTTTGAGCTT GGCTGGAAGC CTCCAGGCTC AAAGCCACAG AAGACAGGGA GCCTGCCCCA 840
AAGTATAGCA AAGACCCTAT GCTTTCAATC ACAACAAAAG ACCCCACACC ATCAGCAGGG 900
TTCAGAGTAA CAGTCAAATA GTCCATTTCA AAGGCACATT TTAGATATAT TCTACAAATT 960
TTGTGTTGTA TATGGACTGA ATATTTATTA TCTCCCTTAT CTGGTCTTCA TGAGAGAGAG 1020
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG CGCGCAAGTG TGTGTGTGTG TGTGTGTATG 1080
TGTATGTGTT GGGGCTGGAA AACATCATTT GTTGCTCTTA CAAAGAATAC TGGGTCCATT 1140
CCTAGCACTC ACATGGTATC TCACATCATG TATACCTCCA GTTCCAGGGG ATCCAACAAT 1200
CTGAGCTCTG TGGGCACCAG GCATATGGAA CACATATGCA GGCAAAATAC 1250