EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-12576

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr2:32364660-32366000

Target genes

Number: 31
Name	Ensembl ID

Ppapdc3	ENSMUSG00000051373
Prrc2b	ENSMUSG00000039262
Gm13610	ENSMUSG00000086216
Pomt1	ENSMUSG00000039254
Uck1	ENSMUSG00000002550
Gm13611	ENSMUSG00000066068
Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Lcn2	ENSMUSG00000026822
Ptges2	ENSMUSG00000026820
Gm13413	ENSMUSG00000083004
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
AL772271.2	ENSMUSG00000093277
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013
Tor2a	ENSMUSG00000009563
Ptrh1	ENSMUSG00000053746
Rpl12	ENSMUSG00000038900
Snora65	ENSMUSG00000065124

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr2:32364970-32364985	GAGGTCATAGGGTCA	+	6.04
Rarb	MA0857.1	chr2:32364969-32364985	AGAGGTCATAGGGTCA	+	6.66
Stat6	MA0520.1	chr2:32364681-32364696	ATTTCTGTGGAAGAA	-	6.09
ZNF263	MA0528.1	chr2:32365670-32365691	GGAGCAGGGTGAGGAAGAAGA	+	7.38

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01404

chr2:32342475-32443798

Th_Cells

Enhancer Sequence

CCTCACAGTG TACCTGCGCA GATTTCTGTG GAAGAAACGG AAGTTATGGT CAGCCCACCT 60
TTGTGAAGTA TTATGAGTTT AGAACAGGCG CTCCCACACT TTGGGGCTAG TAATACTGGC 120
TCTACTCCAC ATCTGGGAAA ACCACAGGTA GGAAGGCCAA ATGGCTGAGC CAAGGTCACA 180
GAGCCAGGTC TGACCCCACT GCCCCACTTC ATCCCAAATC CCAACTCCCT CAAACCCCAC 240
TAAAGAACTC TCCAAGGCTG CCTCACGTGA GGTCTGTGGT CAATTTACCC TCTTTTCTGG 300
CTTCCTGCCA GAGGTCATAG GGTCACACTT GAAAGACTTC CTCCAACCCT GCAAGTCATC 360
ACTCTGGAGG ATTCTGCCTG AATTAGAAGC AGGAACCATT TCCTATATGC TGCAAAAGGG 420
CGCGGGATGA ACTGGGGCAG CATTCCAACC TCTTAACAAT GTGTGTCCCT TCCTCCCACC 480
CGTGCCCCAG GAAGGAAACA GGCAAGTGTG CAAAAATGCA CATACAAGCT GGAGTGTACA 540
CAGAAACATA TCAAATAAAG TGATGCTCTC AATACTTGTC GGTCGCACTA CATGGTCATT 600
AACAATCATA ACGTAAGGGG TTGTGAGAGA GCCAGGCACT TGTTGCAAGT CTGATTGCTA 660
CCATTCAGGG GTCTTAACTG GGTGAAAAGT CAGGGGAAAA AATCAGGTAT CATTGGAGCA 720
ATCTGAAACA CAGAACAGAA GCACACAGAC AGCATTGAAA GGCTCGTATT AGGAGTAAGG 780
AGACAGACAT AGCAGACACA CAGAGAAAAA GACACTCTGC ACGGCAAAAA AGAGACTCAG 840
GGAGCTGAGT CTAGCTTCCT GAGGCCTGGG AGTTTCTAAG GTCTTTGAAG GCGTTTCCTT 900
CCCCTGGTTT AGGCTTGATC AGCTCCCAGC TGCTGTGTAA ACACATCTGA TCCGGCCTTG 960
TAAAGCCCAA AGGGCCTTTG TTTAAGTTGC AAGGTTTTTG TCCAAGGTCG GGAGCAGGGT 1020
GAGGAAGAAG ACGGCCATCT TGGAAGTTCC CAGCCCTTCT CCCTGGCCAT CTGCCTTTTA 1080
GAGAACCTGT GTGACTCCTA GTCCTTCAAT CCTGGGCCCT ACCTGTTGTA AGGCGAGAAC 1140
GGACTCCTGA AAGTAGTCCT CTGAGCATGT CCACGTGTAC AGAGAGACAC ACGTTCTGGG 1200
GGACACTTAC GCCTATGTAC ACACAAAACT TAAAGCAATT TAAAATGGAA ACAGTTTTAA 1260
AATATGTAAC GGGATGAAGA TGTGGCTCAG TGGGTTTGTG ACACAAGTGT CAGACCTGAG 1320
TTTAATCTTC AGATTACATG 1340