EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-10921

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr18:34379690-34380630

Target genes

Number: 8
Name	Ensembl ID

Epb4.1l4a	ENSMUSG00000024376
Gm10548	ENSMUSG00000073607
Srp19	ENSMUSG00000014504
Reep5	ENSMUSG00000005873
Pkd2l2	ENSMUSG00000014503
Fam13b	ENSMUSG00000036501
n	ENSMUSG00000064857
Cdc23	ENSMUSG00000024370

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr18:34379946-34379967	TTTTAGTTTTACTTTTTTTTT	+	7.48
Spz1	MA0111.1	chr18:34380023-34380034	GCTGTAACCCT	-	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10807

chr18:34379473-34383655

Olfactory_bulb

Enhancer Sequence

TGGCCTGGAG GCTCTTTCAA CATGGCCTCT ACCATTCTAG CACCGTCTTC GAACTTTACT 60
TCTATTTGTC CGTCTTCCCT CACAAACTCA TTCCGCCTAA ACTTCCTGTG TTCCTGTCCC 120
CTTGACATGC TCCGTTCCAG TATCTTCCCA GGGCATCTGG TCAGTCAGTC TTAGGGTCAT 180
ATGTTACCTG TGGGAAGAGA TTGCGCAACA CCGTCCCTTG GTTTGTTCTT TTTCTATTCC 240
TTATCACTAC CATCATTTTT AGTTTTACTT TTTTTTTTTT TTGTCTATTC CTTCATACTA 300
GAGTGTGAAT TCCATGCGTT TATATTCCCC AATGCTGTAA CCCTAGAAGC GGGATCAGTT 360
TGTATAATAA GTGTTAACAC CCAAAGAAAA TTATGATAGA CAGGTAATGC AAGCTGTCTG 420
ATAGCTGTTT GAGACAAACT GGGGATGTCC GGAGCAGGTA GGTTTGGAAT TAAATCGGGA 480
GAGGACGGAC GGCTGGAGGG GCACCTACAG AACAAAAACC GATTTCTGTC TTCTCCACCG 540
GGCTAGGGAC TCCCTTTGCT CTAGGATCCA TATTCACTCA TTTATCTATT ATCAGTGCGC 600
TAGCCCAGGA CGTGGCAATT GGTGGATGCT TGATATGAGC AGATGCTCAC GATTAGCTGT 660
AGTGTGCGCA GGAAAAGTCT ACCAATTTGG TTTCAGTTCA ATTGAGAAAG GTGAGCAGGT 720
TAGAGACTCA GGATCCCCGG AGCAAAGACC AGAAGAGAGG AACGAAATAC CGCAGAGGCA 780
GGGCATAGGC TGCTGCGGCT GCGCAGTCCA ATCCCTCATT CCGGAGCAGC GGGACGCCGG 840
CCAGCCGCTC CCATCGCGCG TGCGCACTGC CCGCTTCCCG CCTCCAACAA GATGGCGAAG 900
GCCCTGTGCT GAGGGGGCGG AGTGTGGCTG CCGGAAACCC 940