EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-10009

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr17:29214860-29215360

Target genes

Number: 8
Name	Ensembl ID

Kctd20	ENSMUSG00000005936
U2	ENSMUSG00000084632
Srsf3	ENSMUSG00000071172
Cdkn1a	ENSMUSG00000023067
Gm16194	ENSMUSG00000084956
Rab44	ENSMUSG00000064147
Cpne5	ENSMUSG00000024008
Mtch1	ENSMUSG00000024012

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ascl2	MA0816.1	chr17:29215145-29215155	AGCAGCTGCT	+	6.02
Ascl2	MA0816.1	chr17:29215145-29215155	AGCAGCTGCT	-	6.02
RREB1	MA0073.1	chr17:29214940-29214960	GGGTGGGGGTTTGTCTGGGG	-	6.04

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01354

chr17:29168861-29232920

Th_Cells

Enhancer Sequence

TTCAACCAGA GGGCTCTCTC TGGAAGTAGA CACAGGTTAT GTGTGCCGCT ACTACCTCTG 60
GGAAGGAAAT GGTGGCTGGA GGGTGGGGGT TTGTCTGGGG TCCGGAAAGA CTTTTGTTTT 120
TGTTTTTAAC CAACATCCTT TTTCATCTTT TGACTGTTAT TCCTGGGAAT GTATTACGGA 180
CTCAACAAAA TAAATACAGG AAATTATGGA AAAATGAAAC TGCACTTTGG ACTATACTAC 240
AAATAGAATT TTTAAAGATA TTTGGAAAAA GAAATGAGCG GAGCGAGCAG CTGCTATTGA 300
TGGTGTCAAA GCAGTGTTTG TCTTCTCAAT CCTGCTGACT GCAGTGGGTC CAGGCTTGGA 360
GCGGCTCAGG CTAACAGCCC TGAGTGGGGG TGGGGTGGAG TGGGAGGTCG GTTGGCAAGC 420
TCTTGGCTGA GGTTTCCTAA AACCTGGAGG GGCCGTGGCG GAGGCGGGGC TCTTCTTGCA 480
GAAAGCCGCA CAGCCCGAGG 500