EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-09875

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr17:25706330-25707050

Target genes

Number: 20
Name	Ensembl ID

Ube2i	ENSMUSG00000015120
Tpsab1	ENSMUSG00000024173
Tpsb2	ENSMUSG00000033825
Tpsg1	ENSMUSG00000033200
Cacna1h	ENSMUSG00000024112
Tekt4	ENSMUSG00000024175
Sox8	ENSMUSG00000024176
2810468N07Rik	ENSMUSG00000091475
Lmf1	ENSMUSG00000002279
Chtf18	ENSMUSG00000019214
Rpusd1	ENSMUSG00000041199
Narfl	ENSMUSG00000002280
Ccdc78	ENSMUSG00000071202
Fam173a	ENSMUSG00000057411
Gm17480	ENSMUSG00000091321
Metrn	ENSMUSG00000002274
Fbxl16	ENSMUSG00000025738
Jmjd8	ENSMUSG00000025736
Stub1	ENSMUSG00000039615
Rhbdl1	ENSMUSG00000025735

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PRDM1

MA0508.2

chr17:25706664-25706674

TCACTTTCAC

6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04091	chr17:25703705-25708120	Cortex
mSE_11116	chr17:25705430-25706860	Olfactory_bulb

Enhancer Sequence

CTCAAGAAAG ACAACAGGAC CCAGTGAAAA CTATACTTCG ACAAAGGCAA GGAAGGCTTT 60
CTGGAAACCA GCCATCCCAA GTTGCCAGGA GTGATGGAGA AACTCCGGGA GATTGTCCTC 120
AGAGCACACA CACACACACC CTGAGAATCT CTCGACCTTG AACCTCAACT TGCCGGCCAA 180
GCTGAGAGGG CAAGACAACC TGGCTGTCCT GCTCAGCCCA GTATCACTAC TACACACTGT 240
TTCAAACTCG AATAGAGGCA GCTTGGGAGG TGGGACTGTG CAGCTGTCTT CAATAATGCC 300
TGCCTTTCTC AGGCCAAAGT GCTCATTGAG CCTGTCACTT TCACCTGCTC TTTCCTTCCC 360
CAATTCCAGG TTCCTGTGGC CTGGGAGCAG TACCTGCCAG AGGACTTGGA CTCCTCATGG 420
ACCCCGGAGT CCCAGCTTCT GCCCAGGACA AAGCAGCTTG ATGCCTACCC AATATGCCTA 480
CAGGCCGTGG TGGCCACTCG ATGCTAGGAT CCCCAGTTCT GCAGTTCTCA GCAGGATATC 540
CCAGGAGAGG AGAAAGGACT GGAGGGTCAC ACTCCAGGCA CTGGCCTCCG TCCATCTCCA 600
AAGTCCCACA CCTGGTGTCT CTGTTGACCA GACCCACCCT GGAACCAGCC CAGGAGCACA 660
GCCCAAGCTG GGGCACGAAG TCACTCCTTT CCTCAGCCTG AGTGTCAAGA GTCCCCACAC 720